Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01060 ATGTCAGTTGCTCTGCTCTCCACACTATCCTTTCTCATTCTCTTTACACTCTTCTCCATTACTGCTTCTCACTACTCCTTCTCTTCTTCCTCTCCTTCTCCGCAATCTTTACCTTCACTTTTCGATTGGCGATCTGCACACGCCACATACTACGACTCCGCGGATCCCAGGGAGTCTGTTGGTGGCGCTTGCGGCTACGGCGACCTTGTGAAATCGGGTTATGGCATGGCCACTGTGGGCCTTAGTGAGACACTTTTCGAGCGTGGTCGGACCTGCGGCGCGTGCTTCGAGCTCAAGTGCGTGGATGACTTTCGCTGGTGTATCCCTGGCACCTCCATCATTGTCACCGCGACCAATTTCTGTGCGCCCAACTATGGCTTCACCTCCGAGGGTGGGGGCCACTGTAATCCACCCAATAAGCATTTCGTGCTTCCAATTGAAGCATTTGAGAAGATCGCTATTTGGAAAGTGGGGAACATGCCCGTTCAGTATCGAAGGGTAAAGTGCAGAAAGAATGGAGGAATGCGATTCACCATCAGCGGTTCAGGTACCTTTCTTTCGGTCCTGATCACCAATGTGGGTGGCAAAGGAGACATAGTTGGTGTGAAAGTTAAGGGTTCAAGAACTGGATGGCTTCCTATGGGTCGGAATTGGGGCCAAAACTGGCATGTAAATGCATTAGTACAGAACCAGCCTCTTTCGTTTGAGGTCACTGGTAGTGATGGGCTAACAGTTACATCTTATAATGTTGCTCCCAAGGATTGGAACTTTGGACAAACCTTTGAAGGAAAGCAATTTGAGTATTAAAAGCATCAAGAAGATAACGTATTTCAACGGGACCAT 843 0.4887 MSVALLSTLSFLILFTLFSITASHYSFSSSSPSPQSLPSLFDWRSAHATYYDSADPRESVGGACGYGDLVKSGYGMATVGLSETLFERGRTCGACFELKCVDDFRWCIPGTSIIVTATNFCAPNYGFTSEGGGHCNPPNKHFVLPIEAFEKIAIWKVGNMPVQYRRVKCRKNGGMRFTISGSGTFLSVLITNVGGKGDIVGVKVKGSRTGWLPMGRNWGQNWHVNALVQNQPLSFEVTGSDGLTVTSYNVAPKDWNFGQTFEGKQFEY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01060 268 Gene3D - 31 170 IPR036908 -
Bach3g01060 268 Gene3D - 171 266 IPR036749 -
Bach3g01060 268 Pfam Expansin C-terminal domain 175 252 IPR007117 -
Bach3g01060 268 PRINTS Expansin signature 132 149 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 100 111 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 173 185 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 113 123 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 149 162 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 185 206 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 73 87 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 249 265 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin signature 220 241 IPR002963 GO:0009664
Bach3g01060 268 PRINTS Expansin/Lol pI family signature 249 263 IPR007118 GO:0005576
Bach3g01060 268 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Bach3g01060 268 PRINTS Expansin/Lol pI family signature 157 173 IPR007118 GO:0005576
Bach3g01060 268 PRINTS Expansin/Lol pI family signature 42 57 IPR007118 GO:0005576
Bach3g01060 268 PRINTS Expansin/Lol pI family signature 211 225 IPR007118 GO:0005576
Bach3g01060 268 PRINTS Expansin/Lol pI family signature 82 100 IPR007118 GO:0005576
Bach3g01060 268 SMART dpbb_1 78 164 IPR007112 -
Bach3g01060 268 PANTHER EXPANSIN-A15 11 266 IPR002963 GO:0009664
Bach3g01060 268 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 61 174 IPR007112 -
Bach3g01060 268 Pfam Lytic transglycolase 79 164 IPR009009 -
Bach3g01060 268 SUPERFAMILY PHL pollen allergen 171 263 IPR036749 -
Bach3g01060 268 SUPERFAMILY Barwin-like endoglucanases 42 192 IPR036908 -
Bach3g01060 268 CDD DPBB_EXPA_N 42 169 - -
Bach3g01060 268 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 184 263 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01060 Bach-Chr3 20997687 20998913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01060 42 267 Expansin Gene Family AT3G03220 80.973 4.87e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01060 - - gmx:100809568 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01060 3 20997687 20998913 Bach3g01060 3 20997687 20998913 ECH