Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01056 ATGACAATGGGAGAAGAGTCCATTTCTGCAATCCCATTTGACAGAGCAGTTGAACAGGCAATTGTATCTATAAAGAAAGGTGCTTACTTACTCAAGTGTGGACGTAGAGGAAAGCCAAAACTCTGCCCTTTCAGACTTTCTCCGGATGAGAAAAATTTGATTTGGTATTCCGGGCAGCAGGAAAAGCATTTGCGACTTACTGCGGTTATAAAAATCATTCAAGGGCAGGGAAATGTAAGGCCCCAGAGGCAAAATCAGCCTGATAAGGAGTGCCCTTCATTTTCGCTGATCTATTCCAATGGTGAACGCTCGCTTGATCTGATATGCAAGGACAAAGCACAGGCTGCAACTTGGTTTGTCGGCTTGAAAGCTGTGATATCTAGGTCTCAGCATCCAAGGCCTTTCAGTAGTTTAAGAAGCTGCAAAGGGGTACAGAGTTGTCTCAGTAGTCCAGCTGGAATCTTACGAAGAAAGAAAAACCTAGGCCTTCAGGAGGATTCTGCGGATTTTACTCAGGTACGCAGCTTATGTGCAAGTCCTAGTCTATCACTTTCAGAAAGGTGCTTTTCTGATGGCTTATCACATGCTTCTGATAGCTTCTACTCATTGGAGTCGTTGGTATCCAGTACTCAAAGTATAACAGATATTTCAATCCCAAATTCTCCATATATTGATCCAAAGTCTTTCAAAAAGGGTGGATTAGCATGTCTTGACACTGAATATGAGAAGAATTCACCCTATCGACCTCTGATGCCTCCTACTTGCCCGAATGTAGGAAGCAATAATGTGCTGAAGGATGTGATGATCTGGGGTGGATGTATTGGAGGGACAGTAGGGAGTGGGAATGACAGATTTGTCAACCATAATGAAAATCATGCTGTACTGCCAAATTTACTGGAATCCACTGTGATGTTAGATGTGCAAAATATTGCTTTAGGAGGAAAACATGCTGCCTTTGTTACAAAACAGGGCGAAGTTTTCTGCTGGGGTCAAGGGAAAGGAGGAAGGCTGGGGCACAAAATTGATTTTGATGTGAATTCCCCCAAAATTGTAGAGTCTCTTAATGGGATCCATATAAAAGGTGTTTCCTGTGGTGAGTATCATACATGTGCTTTGACAGATTCTGGTGAAGTATATACTTGGGGTGATAATGGTTATGGTGCAGATTTTGGTGCTGAAAGGACACACAGAAGTCAGTGGATACCACATAAACTTTCTGGTTTAGATGGTATTAGCATTTTAAGTATTGCTTGTGGGGAATGGCATACAGCAATTGTGTCTTCCTGTGGGCAGCTATTTACATATGGAGATGGTACATTTGGAGTTCTTGGGCATGGGAATCTTAAGAGCATTTCTCAACCAAAGGAAGTTGAATCCCTTAGAGGTCTAAGGGTAAGGTCTGTTGCTTGTGGATCATGGCATACAGCTGCCATTGTTGATGTCATGGTTGACCGTTTTAAGTACAATACCTCTACTGGGAAGCTATTTACTTGGGGTGATGGAGATGAAGGGAGGCTCGGCCATGCTGATAATGGAAGAAAGCTTTTACCAACATGTGTATCTCAACTAGTGGATTATGGTTTCATCCAAGTATCTTGTGGAAGAACATTGACTGTAGCACTTACCAATTTGGGTAAAGTTTTCACAATGGGTAGTGCTGTTCATGGCCAGCTAGGAAACCCACATGCCAAAAGTAAAGCAGTAACAATTGTTGAAGGGCTACTGAAACAAGAGTTTGTTAAAGGAATATCATCAGGTTCATATCATGTTGCTGTCTTGACATCCGCAGGGAGTGTCTATACATGGGGCAAGGGTGCAAATGGGCAGCTTGGGTTAGGTGACACTGAGGACAGGTGCTCCCCTGCTTTTGTAGAGACTCTACGGGACAGGCAAGTAGAAAGTATCACTTGTGGGTCAAGCTTCACAGCTGCAATCTGCTTACACAAACCGATTTCTGTCAGTGACCAGTCAGCTTGTAATGGTTGTAAGTTGCCTTTTGGTTTTACAAGGAAGAAGCATAACTGTTATAACTGTGGTCTTCTCTTCTGCCGTGCATGCAGCAGCAGAAAAGTTACAAATGCATCTCTAGCACCAAATAAGAGCAAGGCTTTTCGGGTTTGTGATCAGTGCTTCAATAAACAGAAAGTAAGAACACCAAGTAATCACAATACTCAGCAGCTACTGAAGAATCGCAAGAAGTTTCCTGATCTGACAGAAGATAGAGGAGAAACAAATGTGACACAAGGTCCACTGTTGTCTCTCAGTCAATCATGCTACAGAAAAAGCACGCCTAGTGGAAGGAAGGAGTGGATCAACCAACAAGAAAGCCAGCACCATTTAGAAAATATTTCTTCTGTTTTGGGTGGAGTTCCACAATGGGGACAAGTTCCTTGCCCTGCCTTGTTTAAAATTAATTGCACAGAAAATTCTGCTGGGCATGGTTCTTTGTCCAAAATTAAATTATCTTCTCTTACCTCTCATAATTTAGAATCTACAGCATCCAACGCCACAAATTCAGAGAAAGATATATCTAGATCAGAAAGAATGCTCATGGAAGAAGTACAGAGATTGAGAGCACAGACTGGGAGACTTGAAGAGCAATGTGAGCTCAGAGACCGTGAGTTAAAAGAATGCCAGAAAAAACTTGAGGAGAGTTGGTTCTTGGCAAGGGAGGAGGCTGCAAAGTGTAAGGCAGCAAAGGATGTCATAACAGCATTGGCATTAAGGATTCATACAATATCAGGAAAAACCAATCCTGGACAAGAAGGAAAGGTTGTTGGAGATGAACATCTACCTAATTTATCACCCATACACACAGATATCCATACCCATACTCCAAAAGATGGCAAAGTGGATAGTCTATCTAGTTCCCCTATAGTATTCTCTGGCAGATTAAGGTCCAAATTTGGGAGAAGCATGTTCCAAAAAAGTGATAGATCAGTGGAGGATCCCCACTGCACTAGAGCTGAATCTCAGCAAGACAGCGCCGAAGGCTCGGCGGTTGAATGGGTAGAAGAGTTTGAGAGTGGTGTTTACATCACACTTACAAAGTTACCTAGTGGGCAAAAGGGCTTCAAGAGAGTGAGATTTAGCCGGAGGAAATTCTCAGAGAAGGAAGCTGAGAGGTGGTGGGAGCAGAATCAAGAGAGAGTCTACCATAAGTATGAGATGGAAGGATATATAAACACAGGCCAAAATCGGGTGAAGGGCTAA 3213 0.4276 MTMGEESISAIPFDRAVEQAIVSIKKGAYLLKCGRRGKPKLCPFRLSPDEKNLIWYSGQQEKHLRLTAVIKIIQGQGNVRPQRQNQPDKECPSFSLIYSNGERSLDLICKDKAQAATWFVGLKAVISRSQHPRPFSSLRSCKGVQSCLSSPAGILRRKKNLGLQEDSADFTQVRSLCASPSLSLSERCFSDGLSHASDSFYSLESLVSSTQSITDISIPNSPYIDPKSFKKGGLACLDTEYEKNSPYRPLMPPTCPNVGSNNVLKDVMIWGGCIGGTVGSGNDRFVNHNENHAVLPNLLESTVMLDVQNIALGGKHAAFVTKQGEVFCWGQGKGGRLGHKIDFDVNSPKIVESLNGIHIKGVSCGEYHTCALTDSGEVYTWGDNGYGADFGAERTHRSQWIPHKLSGLDGISILSIACGEWHTAIVSSCGQLFTYGDGTFGVLGHGNLKSISQPKEVESLRGLRVRSVACGSWHTAAIVDVMVDRFKYNTSTGKLFTWGDGDEGRLGHADNGRKLLPTCVSQLVDYGFIQVSCGRTLTVALTNLGKVFTMGSAVHGQLGNPHAKSKAVTIVEGLLKQEFVKGISSGSYHVAVLTSAGSVYTWGKGANGQLGLGDTEDRCSPAFVETLRDRQVESITCGSSFTAAICLHKPISVSDQSACNGCKLPFGFTRKKHNCYNCGLLFCRACSSRKVTNASLAPNKSKAFRVCDQCFNKQKVRTPSNHNTQQLLKNRKKFPDLTEDRGETNVTQGPLLSLSQSCYRKSTPSGRKEWINQQESQHHLENISSVLGGVPQWGQVPCPALFKINCTENSAGHGSLSKIKLSSLTSHNLESTASNATNSEKDISRSERMLMEEVQRLRAQTGRLEEQCELRDRELKECQKKLEESWFLAREEAAKCKAAKDVITALALRIHTISGKTNPGQEGKVVGDEHLPNLSPIHTDIHTHTPKDGKVDSLSSSPIVFSGRLRSKFGRSMFQKSDRSVEDPHCTRAESQQDSAEGSAVEWVEEFESGVYITLTKLPSGQKGFKRVRFSRRKFSEKEAERWWEQNQERVYHKYEMEGYINTGQNRVKG 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01056 1070 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 430 481 IPR000408 -
Bach3g01056 1070 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 545 596 IPR000408 -
Bach3g01056 1070 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 659 715 IPR013083 -
Bach3g01056 1070 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 468 478 IPR000408 -
Bach3g01056 1070 Pfam Regulator of chromosome condensation (RCC1) repeat 493 541 IPR000408 -
Bach3g01056 1070 Pfam Regulator of chromosome condensation (RCC1) repeat 430 478 IPR000408 -
Bach3g01056 1070 Pfam Regulator of chromosome condensation (RCC1) repeat 597 645 IPR000408 -
Bach3g01056 1070 Gene3D - 245 485 IPR009091 -
Bach3g01056 1070 Gene3D - 488 658 IPR009091 -
Bach3g01056 1070 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 493 544 IPR000408 -
Bach3g01056 1070 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 376 429 IPR000408 -
Bach3g01056 1070 MobiDBLite consensus disorder prediction 976 997 - -
Bach3g01056 1070 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 324 375 IPR000408 -
Bach3g01056 1070 PRINTS Chromosome condensation regulator RCC1 signature 592 613 IPR000408 -
Bach3g01056 1070 PRINTS Chromosome condensation regulator RCC1 signature 266 282 IPR000408 -
Bach3g01056 1070 PRINTS Chromosome condensation regulator RCC1 signature 432 446 IPR000408 -
Bach3g01056 1070 PRINTS Chromosome condensation regulator RCC1 signature 534 552 IPR000408 -
Bach3g01056 1070 PRINTS Chromosome condensation regulator RCC1 signature 416 432 IPR000408 -
Bach3g01056 1070 PRINTS Chromosome condensation regulator RCC1 signature 326 342 IPR000408 -
Bach3g01056 1070 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 653 715 IPR017455 -
Bach3g01056 1070 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 597 648 IPR000408 -
Bach3g01056 1070 SUPERFAMILY PH domain-like 16 126 - -
Bach3g01056 1070 SUPERFAMILY FYVE/PHD zinc finger 652 719 IPR011011 -
Bach3g01056 1070 CDD PH_PLC_plant-like 15 127 - -
Bach3g01056 1070 ProSiteProfiles BRX domain profile. 1001 1056 IPR013591 -
Bach3g01056 1070 Gene3D - 16 133 IPR011993 -
Bach3g01056 1070 SUPERFAMILY RCC1/BLIP-II 266 649 IPR009091 -
Bach3g01056 1070 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 62 904 - -
Bach3g01056 1070 Coils Coil 847 867 - -
Bach3g01056 1070 Pfam Regulator of chromosome condensation (RCC1) repeat 359 387 - -
Bach3g01056 1070 MobiDBLite consensus disorder prediction 976 990 - -
Bach3g01056 1070 Pfam Transcription factor regulating root and shoot growth via Pin3 1002 1055 IPR013591 -
Bach3g01056 1070 Pfam FYVE zinc finger 654 713 IPR000306 GO:0046872
Bach3g01056 1070 SMART fyve_4 647 716 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01056 Bach-Chr3 20969693 20974367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01056 962 1060 Major Intrinsic Protein MIP AT1G31880 32.323 4.69e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01056 - - gmx:100797223 1541.17