Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01044 ATGAAGCTTTCAACATCAGGGTTGGGTCAACAGGGACATGAAGGAGGGGAGAAGAAGTGTTTGAATTCGGAGCTATGGCATGCATGCGCGGGGCCCCTGGTGTCCCTACCAACTGCGGGGACTCGGGTGGTGTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCTGCAACAACTAACAGAGAGGTTGATGGGCACATACCCAATTACCCAAGCTTGCCTCCGCAGTTGATTTGCCAGCTTCATAATGTTACAATGCATGCCGATGTCGAAACTGATGAAGTATATGCGCGAATGACAGTACAGCCATTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCAATGGAATTGGGTATTCCAAGTAAGCAGCCCTCGAATTATTTTTGCAAGACATTAACGGCAAGTGACACCAGCACACATGGAGGATTCTCTGTTCCTCGTCGTGCTGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCCCAGCAACCACCAGCGCAGGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGGCATATTTTTCGTGGACAGCCAAAGCGGCATCTTCTTACAACAGGATGGAGTGTATTTGTTAGTGCCAAGAGACTTGTGGCTGGAGATTCTGTGCTTTTTATATGGAACGAGAAGAATCAGCTTCTTTTAGGAATTCGTCGTGCCAATCGACCCCAAACTGTGATGCCATCATCAGTTCTATCAAGTGATAGTATGCACATTGGACTCCTTGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACAGTTTTCTATAATCCAAGGGCAAGTCCAGCGGAGTTTGTGATACCTCTTTCTAAATATATCAAAGCAGTGTACCATACACGTGTTTCTGTTGGCATGCGCTTCAGGATGCTTTTTGAGACTGAAGAGTCAAGCGTCCGCAGGTACATGGGTACAATAACTGGCATAAGTGATCTGGATCCTGTTCGTTGGCCGAATTCTCATTGGCGATCTGTGAAGGTTGGTTGGGATGAATCAACAGCGGGGGAGAGACAGCCACGAGTATCATTATGGGAAATTGAGCCTTTAACAACTTTCCCCATGTATCCATCACTATTTCCTCTCAGATTGAAACGTCCATGGCATCCTGGCCCCTCATCTTTGCATGGCGGCAGAGATGACGCAACTAATGGGCTAATGTGGTTGAGAGGTGGAGACCAGGGTCTTAACTCCATGAATTTTCAAGGTGTTGGTTTGTTGCCCTGGATGCAGCAGAGACTGGATCCAACCTTGCTTGGAAATGATCATAATCAGCAATACCAAGCCATGTTGGCAGCTGGTTTGCAGAGCCTAGGGAATGGAGATCTCTTAAGGCAGCAAATGATGCATTTTCAACAGCCTTCTAATTACCTTCAACAAGCAGGAAACCATAGTACTTCTCTGCAACTTCAGCATCAACAAGCAATCCAGCAGTCAGTCCCTTCTAATATAATGCAGCCACAAGGGCAAGTATTGACGGAGAATCTGTCACAGCATCTCCTCCAAAAGCCACATAACAATCAAGAAGATCAAGCACAGCAGCAGCAAAGTACTTATCATGATGCACTTTTGATTCAAAATGATCAGCTCCATCAGAGGCAACACTCTAATGTGCCATCACCATCATATTCTAAGGCTGATTTCTTAGATTCTACCATCAAATTCTCTGCATCAGTTTCCCCTGTACAAAATATGCTTAGTTTACTTTGTCCTGAAGGTAGTGGCAACCTTTTGAACCTATCAAGAAGCAGTCAGCCTGTGCTGACTGAACAGTTTCCCCAACAATCATGGACTCCAAAGTATCCACCTGTGCAGGTCAATGCTTTTGGCAATTCAGTGTCGCCCACGCAATATACTGTAAAAGATTCTGCAATGGTGCCACAACACTATAATTCAGATGCCCAAAATCCTACACTCTTCGGTGTTAATATTGATTCATCTGGCCTTCTACTCCCCACCACTGTCCCTGGTTTTACCAGTTCATCAACTGGTACTGAAGCCTCGACAATGCCATTGGGGGATTCCGGATTTCAGAGTCCTCTATATGCTTGCATGCAAGACTCATCAGAGTTGTTGCAGAGTTCTGGGCAAGTTGACCCACAAAACCAAAATCAGACATTTGTCAAGGTTTACAAATCAGGGTCAGTTGGGCGCTCACTCGACATTTCCCGGTTCAGCAGCTATCATGAACTGCGAGAGGAGTTGGCTCAGATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCCTTCGTCAACAATGTCTGGTACATCAAAATACTTTCACCAGAAGATATTCAGAAAATGGGAGAGCAAACAGAATCTCAGGACCTTCTTTCTGGGCTACCTTCAGTTGGCTCACTTGAATATTGA 2475 0.4582 MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYARMTVQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPAEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGPSSLHGGRDDATNGLMWLRGGDQGLNSMNFQGVGLLPWMQQRLDPTLLGNDHNQQYQAMLAAGLQSLGNGDLLRQQMMHFQQPSNYLQQAGNHSTSLQLQHQQAIQQSVPSNIMQPQGQVLTENLSQHLLQKPHNNQEDQAQQQQSTYHDALLIQNDQLHQRQHSNVPSPSYSKADFLDSTIKFSASVSPVQNMLSLLCPEGSGNLLNLSRSSQPVLTEQFPQQSWTPKYPPVQVNAFGNSVSPTQYTVKDSAMVPQHYNSDAQNPTLFGVNIDSSGLLLPTTVPGFTSSSTGTEASTMPLGDSGFQSPLYACMQDSSELLQSSGQVDPQNQNQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEQTESQDLLSGLPSVGSLEY 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01044 824 FunFam Auxin response factor 292 364 - -
Bach3g01044 824 FunFam Auxin response factor 710 804 - -
Bach3g01044 824 Pfam AUX/IAA family 710 799 IPR033389 -
Bach3g01044 824 Gene3D - 126 229 IPR015300 -
Bach3g01044 824 FunFam Auxin response factor 126 230 - -
Bach3g01044 824 Gene3D - 711 804 - -
Bach3g01044 824 SMART B3_2 128 230 IPR003340 GO:0003677
Bach3g01044 824 Gene3D - 292 364 - -
Bach3g01044 824 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Bach3g01044 824 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Bach3g01044 824 CDD B3_DNA 127 228 IPR003340 GO:0003677
Bach3g01044 824 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Bach3g01044 824 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 804 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach3g01044 824 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach3g01044 824 SUPERFAMILY CAD & PB1 domains 707 789 - -
Bach3g01044 824 ProSiteProfiles PB1 domain profile. 715 799 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01044 Bach-Chr3 20867951 20873816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01044 98 808 B3 DNA Binding Superfamily AT5G37020 68.880 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach3g01044 AUX_IAA 5.9e-08 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01044 3 20867951 20873816 Bach3g01044 3 20867951 20873816 ECH