Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01039 CTTCTCTGTTGCAATTTGCAAACTTGCAAAGCACCATGGCCCACGACTCTATCGAGCCAGCCAGCGATGTCAAGCTGTTCAATCGTTGGACCTTTGAGGATGTTCAGGTGAATGACATATCTTTGGTTGATTACGTTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTACCACATACTGCTGGGAGGTATTCAGTGAAGCGTTTCAGGAAAGCCCAATGTCCAATAGTGGAGAGGCTTACCAACTCTCTTATGATGCATGGAAGAAATAATGGAAAAAAGCTTATGGCAGTAAGGATTGTAAAGCATGCGATGGAAATCATTCACTTGCTCACTGAACAAAATCCTATTCAAGTTATTGTTGATGCTGTTGTTAACAGTGGACCAAGAGAAGATGCTACCCGAATCGGATCTGCTGGTGTTGTTAGGCGTCAGGCAGTGGATATTTCTCCCCTGCGACGGGTGAATCAGGCTATCTATCTTCTGACAACAGGAGCTCGTGAGGCTGCATTCAGGAACATCAAGACAATTGCAGAATGCTTGGCTGATGAACTTATAAATGCTGCTAAGGGGTCATCAAACAGCTATGCCATTAAGAAGAAGGACGAAATTGAGAGAGTTGCCAAAGCAAACCGTTGAAGAATGCAAAGTGGCTCAGCGATGAGAGTTTTGTTTTTGAGCTGGTTTTGTTTTTTTTCCCTTTTTCAGTTGGATGTTTTTACTCTTGAACCTATAATGAAGATACAGTTGGTCGCTAGTTATTTATGAAGATTGAGCGTTTGTTTTAGATTTTATATTATTGAAGGTAAAACATGGAGTTTGAATGCAG 828 0.4227 MAHDSIEPASDVKLFNRWTFEDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTEQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01039 200 NCBIfam 30S ribosomal protein S7 12 200 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bach3g01039 200 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 200 IPR000235 GO:0006412
Bach3g01039 200 FunFam 40S ribosomal protein S5 1 200 - -
Bach3g01039 200 SUPERFAMILY Ribosomal protein S7 13 200 IPR036823 -
Bach3g01039 200 CDD uS7_Eukaryote 13 200 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bach3g01039 200 PANTHER RIBOSOMAL PROTEIN S7 9 200 IPR000235 GO:0006412
Bach3g01039 200 ProSitePatterns Ribosomal protein S7 signature. 66 92 IPR020606 GO:0003723|GO:0003735|GO:0006412
Bach3g01039 200 Gene3D Ribosomal protein S7 domain 1 200 IPR036823 -
Bach3g01039 200 Pfam Ribosomal protein S7p/S5e 54 200 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01039 Bach-Chr3 20849051 20851630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01039 10 200 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 91.623 1.14e-133 371