Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01036 ATGGTGGAGGAGGAGCCGTCCGAGGGGGAAGTTGGGAGTGATTTACCACCGGATAGCCTCCGTTGTAATCGTAGCGATGGCAAGTCCTGGCGCTGTAAGCATTGGAGAATTCACAATCACAGCTTGTGCGAGCGCCATTATTTAGATTCTAAGGCTAAGGCCAAGAAGAAGCAAGGTAGAAGGAAAGGCGGGGTTGTATATGAGAACAGAAGCAAGAATATGAAACCTCTCAAGGGTGTAAAGGTGGCTTATTCGGACCCCAAACCCCTGTACGATGAAAGCGATGAAGAGGAAGTGATCCCCCAGAAGAAAAATCGGAGTGGCAATGCCAATTGCCATAGCGATGGAAATGTGAAGAAAGGGCTTTTGAGTGATCGTAAGAGTAGTACGGAATGGAAGAGGAGCCGAGAGGGATTTGAAGAGGAGAAGGTAGTATTGAGGAAAAAGAGAAAGCTTGAGGATAATTTGATTAGTAGAGGAGGAAAAAATACTCACAAGAATATTGTTAAGAAGAAGGAGGAGTTGAGAGTAGAAGAATCTGAGGAGGAGGCAATTCCGAAGAAAAAGAGCAAGCTTGAAACAAAATTGATCAGATGGATGGGAAAAAGTGTCGAGAAGGATCTTGTTAAGAAGAAAAAGTTGAAAGTAGAAGAATCAGAGGAAGAAGATGAGAGAGAAGAGAAGAAGGGTGATTCACAAGTAAGGATAACGGAGAGAAGAGCTAGGAGGGGAGCCAATAGATTGATCCAAGCAGAAAGGGAGCAAGAACATGAAGGAATAAGAACGCGAGGTTCTAAAAGTAGGCTGGTTGACGGTAGAAGTAATGCCAAGTTCTCTACTGCCTCCAAGGGGAAAGAAGGCGCGTACCAGATGTGCCATCAATGCCAAAGAAGTGATAAGAAAGTTATTTGCTGTCAAAAGTGTGAGAGCAAACGCTTTTGTATACCATGTATTCAGAGATGGTATCCGCAAATGTCTGAGGAGACAATAGCAGAATCTTGCCCGTTTTGTAGAGGAAATTGCAACTGCAAGGCATGTTTACGTAGGGATGACCTAGTTAAGGATTCTGAAAATTTAGGAATGCTGGTCAATAGAAATGAAAGGATTCAGCATTTGAAGCACATGGTAAAAGTATTGTATCCTTTCCTGAAACAGTTTGATTTTGACCAGAAGTTGGAAAGAGAGATGGAAGCAAAAGTTCAAGGCTTATCACTTTCAGAGGTAGAGGTAAAGCAGATTGATTGTTCCAACTATGAGCGCATTTATTGCAATAACTGCAAAACCTCTATTATTGATTATCATAGGAGCTGTCCAAATTGTTCATATGATCTTTGCCTTACTTGTTGCCGGGAAATTCGTGACAAATTTTTGCAAGAAGAAATAGTTAAGGAGAACATTGATAATGATGCTCACTTGCAGAGTTCAGAGCCTCTAGCTCTGCACTCATTGGAGAAAGGATCTTCAGATATTTGTCTTGAGTCAAGCTCTAAGAAAACTGTGACCCCTAAGCATGAGTGGAAGGTAAAGAAAGGTGGTTTCATTTCTTGTCCAGCAAAAGATAACAATGGTTGTGGGCATGAATATCTAGAGCTGAAGTGTATATTTTCACAAAATTGGGTTTCAGAGTTAACGAAAGAAATAACAAGATTGGTAGAAATACACAAATTAAAGGATATGCCTACAGTTTCTGTGCAGTGTACTTCCTGCTTCAAATCAAATGAAGAAATTGACTCCTGTAGTGACAAGTTGCGGAAAGCTGCCTCTCGTAAAGATTCCAGTGATAACTGTTTGTATTGTCCTCCTGCAAGTGATATCCAGTGTGGTGATCTGGAGCATTTCCAGAGCCATTGGATTAAGGGAGAGCCGGTAATTGTTAGGGATGTTCTTGATTTAACCTCTGGCCTGAGCTGGGAGCCAATGGTAATGTGGCGTGCATTACGTGAGAGAGCTTATCAAGGTTCCAAACTTTTGACTGAGAGAGCAATTGACTGCCTAGATTGGTGTGAGGTTGAAATAAATATTCATCAATTTTTCAAGGGATACATGGAGGGTCGTGTTCATCATGACTGTTGGCCTGAGATGCTCAAGCTCAAAGATTGGCCCCCATCTAATTCATTTGAGGAGCGGTTACCACGTCATGGTTTGGAGTTTATCAGTGCGTTGCCCTATAAAGAGTACACCCATCCCCATTCTGGCATTCTTAACATGGCTACAAAGTTGCAAGAAGAATCTTTGAAACCTGACTTAGGGCCGAAGACATATATAGCATATGGATTTCCAGATGAGCTTGGACGGGGAGACTCAGTGACCAAGCTTCATTGTGACATGTCAGATGCGGTAAATGTTCTGACGCATACTGCAGAAGTAACCCTTTCACAGCGACATCTTGGCAAAATAAAAGAATTGAAACGGAATTACGCTGAAATAGATGAAAAGGAACCTCTTGGGGTTTTGCAAGGGAAGTTAACGTTAAAAAAAGATATTGCATTGAAGGCAGAAGATGTTTCGTCAAGTCTTCTAGGATCTTCTCTCATTCAAATTTCAGAAATAGAAAATAATGGTTCCTCTCCAAAGCCTGATACTGCTAAACAACCATGTGAAGACACTATCGAGAAAATTGGTGATGCTGCGGCTTCTAACCTGGAATCAGATTCTTCTGAATCTGGTTTTCTGGCAGATGCCCTAGTATCCTCTGAGAATATTGACAATGCAGATTTTTCTGGGGTAGTAACTGCTACTAACAAGGAAATTCTTATGGAGGAATGCCAGAAGCTCAGTACCGAGCATAATGTTGCCGTGATGTGCACTACATCTAAGGAGATAAGGAGCAGTACTTTGGATGATAAAATTGAAGAGGGTAACATAGATTTTGAGAAAAATGTTAGTCAGACTGTGGATTCTAGAAATGAACATGATGGACAAGACTTGGCCAATGGAGGTGCTGTCTGGGATATTTTTCGGAGAGAAGATGTGCCCAAGCTTCAGGAATACCTTAGAAAGCATTATGAGGAATTTAGGCATCTCCATGGTTCTCGAGTGAAGGAGGTTGTTCACCCTATTCATGATCAAGTTTTTTATCTGACTTCTCACCATAAAAGGAAGCTCAAGGCAGAATACGGAATTGAACCTTGGACTTTTATACAAAACCATGGTGAGGCAGTCTTTATACCTGCTGGGTGTCCCCATCAAGTTAGAAACTTAAAGTCATGTATAAAGGTGGCTCTAGACTTTGTCTCTCCCGAAAATATTCAAGAGTGTCTTCGTCTTACTGAGGAATTTCGCACTCTTCCCCCAAGCCATAAGGCTAAGGAAGATAAACTTGGGGTAAAGAAAATGGCTCTTTACGCCTTACGCTGGGCTGCAGACGAATTGGAAGAGCTTGTTGGTTGA 3390 0.418 MVEEEPSEGEVGSDLPPDSLRCNRSDGKSWRCKHWRIHNHSLCERHYLDSKAKAKKKQGRRKGGVVYENRSKNMKPLKGVKVAYSDPKPLYDESDEEEVIPQKKNRSGNANCHSDGNVKKGLLSDRKSSTEWKRSREGFEEEKVVLRKKRKLEDNLISRGGKNTHKNIVKKKEELRVEESEEEAIPKKKSKLETKLIRWMGKSVEKDLVKKKKLKVEESEEEDEREEKKGDSQVRITERRARRGANRLIQAEREQEHEGIRTRGSKSRLVDGRSNAKFSTASKGKEGAYQMCHQCQRSDKKVICCQKCESKRFCIPCIQRWYPQMSEETIAESCPFCRGNCNCKACLRRDDLVKDSENLGMLVNRNERIQHLKHMVKVLYPFLKQFDFDQKLEREMEAKVQGLSLSEVEVKQIDCSNYERIYCNNCKTSIIDYHRSCPNCSYDLCLTCCREIRDKFLQEEIVKENIDNDAHLQSSEPLALHSLEKGSSDICLESSSKKTVTPKHEWKVKKGGFISCPAKDNNGCGHEYLELKCIFSQNWVSELTKEITRLVEIHKLKDMPTVSVQCTSCFKSNEEIDSCSDKLRKAASRKDSSDNCLYCPPASDIQCGDLEHFQSHWIKGEPVIVRDVLDLTSGLSWEPMVMWRALRERAYQGSKLLTERAIDCLDWCEVEINIHQFFKGYMEGRVHHDCWPEMLKLKDWPPSNSFEERLPRHGLEFISALPYKEYTHPHSGILNMATKLQEESLKPDLGPKTYIAYGFPDELGRGDSVTKLHCDMSDAVNVLTHTAEVTLSQRHLGKIKELKRNYAEIDEKEPLGVLQGKLTLKKDIALKAEDVSSSLLGSSLIQISEIENNGSSPKPDTAKQPCEDTIEKIGDAAASNLESDSSESGFLADALVSSENIDNADFSGVVTATNKEILMEECQKLSTEHNVAVMCTTSKEIRSSTLDDKIEEGNIDFEKNVSQTVDSRNEHDGQDLANGGAVWDIFRREDVPKLQEYLRKHYEEFRHLHGSRVKEVVHPIHDQVFYLTSHHKRKLKAEYGIEPWTFIQNHGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENIQECLRLTEEFRTLPPSHKAKEDKLGVKKMALYALRWAADELEELVG 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01036 1129 Coils Coil 209 231 - -
Bach3g01036 1129 Pfam JmjC domain, hydroxylase 980 1077 IPR003347 -
Bach3g01036 1129 MobiDBLite consensus disorder prediction 49 134 - -
Bach3g01036 1129 MobiDBLite consensus disorder prediction 1 27 - -
Bach3g01036 1129 ProSiteProfiles Zinc finger RING-type profile. 292 338 IPR001841 -
Bach3g01036 1129 FunFam Transcription factor jumonji (JmjC) domain-containing protein 912 1103 - -
Bach3g01036 1129 SMART cupin_9 710 1094 IPR003347 -
Bach3g01036 1129 MobiDBLite consensus disorder prediction 88 103 - -
Bach3g01036 1129 MobiDBLite consensus disorder prediction 119 134 - -
Bach3g01036 1129 SUPERFAMILY Clavaminate synthase-like 604 1125 - -
Bach3g01036 1129 Coils Coil 792 812 - -
Bach3g01036 1129 MobiDBLite consensus disorder prediction 226 270 - -
Bach3g01036 1129 Gene3D Cupin 598 835 - -
Bach3g01036 1129 Gene3D Cupin 921 1103 - -
Bach3g01036 1129 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 1127 IPR045109 GO:0032454|GO:0033169
Bach3g01036 1129 MobiDBLite consensus disorder prediction 215 275 - -
Bach3g01036 1129 ProSiteProfiles WRC domain profile. 16 60 IPR014977 -
Bach3g01036 1129 ProSiteProfiles JmjC domain profile. 729 1094 IPR003347 -
Bach3g01036 1129 Pfam WRC 17 57 IPR014977 -
Bach3g01036 1129 CDD cupin_RmlC-like 1018 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01036 Bach-Chr3 20821452 20832237 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach3g01036 JmjC 5.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01036 K15601 - csin:114299718 967.607