Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01012 ATGCTACAGCAGCGCAAGCCCGACGCTCCAAGTATCCTTTCTGAGGATGTGAGTTCTTACAGTAACCCACCATGTAGAACGAGGAGAAAATCTCATCAAAAGCTAGTAAGGATCATACTCACTGACCATGATGCTACTGATACGGACTCTTCCAGCGATGATGAGCCAGAAAACCCAGTGAGATTCCCAAGAGTTAAGAGGCAAATTACCCAGATCAAAATGGAACTTTCTTTCCCAGATTCCCCTTCTTCTCCTTCATGCTCCTCTTTCTCCTCTGCTAAGCAGGGCCCGACCCATGTTAAGAGACCCAAGAAATCACCCAACTGCAACGGCTCCTCTCGTCGCCATAACAAGTTTAGGGGCGTTCGCCAGCGGCCGTGGGGAAAATGGGCCGCCGAGATCCGGGACCCGATCCGACGGAAACGGGTGTGGCTCGGAACATTCGACACGGCGGAAGAAGCTGCCACCGTGTACGATAAGGCTGCGCTGAAGTTGAAGGGTCCTAACGCCGTTATCAACTTCCCCAACACCATGATGACGGAGGTGGAAACTGAGACAACGGTGGCCGTTAGCAGTCCAAGCTCCGACGGTGTCATCTCCTCCGAAACGATTGCCTCACCCACGTCCGTCCTACCTTACGACGGCGAATCAACACCGTTCGACGGTTTCGGTTACGGCGCCGTCGATGCCTTCGGTTTCGATATTGACGTGCCGTTAAGTGTGCCAGACATGGGTATGATGTTGTCGAGCCAGCAGTTCAGAAAGGAAGAGTTCGGCGAGTTTGACATCGACGATTTCTTCTCGTGGCCCAGCTGA 816 0.5306 MLQQRKPDAPSILSEDVSSYSNPPCRTRRKSHQKLVRIILTDHDATDTDSSSDDEPENPVRFPRVKRQITQIKMELSFPDSPSSPSCSSFSSAKQGPTHVKRPKKSPNCNGSSRRHNKFRGVRQRPWGKWAAEIRDPIRRKRVWLGTFDTAEEAATVYDKAALKLKGPNAVINFPNTMMTEVETETTVAVSSPSSDGVISSETIASPTSVLPYDGESTPFDGFGYGAVDAFGFDIDVPLSVPDMGMMLSSQQFRKEEFGEFDIDDFFSWPS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01012 271 PIRSF PTI6 11 271 IPR017392 GO:0003700
Bach3g01012 271 MobiDBLite consensus disorder prediction 1 117 - -
Bach3g01012 271 CDD AP2 118 177 IPR001471 GO:0003700|GO:0006355
Bach3g01012 271 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Bach3g01012 271 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Bach3g01012 271 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Bach3g01012 271 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 32 190 - -
Bach3g01012 271 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Bach3g01012 271 FunFam Ethylene-responsive transcription factor 2 117 176 - -
Bach3g01012 271 Gene3D AP2/ERF domain 117 177 IPR036955 GO:0003700|GO:0006355
Bach3g01012 271 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Bach3g01012 271 MobiDBLite consensus disorder prediction 74 96 - -
Bach3g01012 271 SUPERFAMILY DNA-binding domain 118 176 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01012 Bach-Chr3 20600274 20601089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g01012 26 213 AP2-EREBP Transcription Factor Family AT4G27950 45.918 2.02e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g01012 AP2 4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01012 K13434 - qsa:O6P43_035061 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01307 12 9121607 9122449 Bach3g01012 3 20600274 20601089 BWGD
Bach3g01012 3 20600274 20601089 Bach3g01012 3 20600274 20601089 ECH