Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00980 ATGCCTGCAAGCTTAAGGAATCTATCACTTTCTCCCAAAATCTTCTCCTTCACCTTACTTCTTTCAATAAACACTCTTCTCTTTTCATGTTGTTACTCCATTAATGAACAAGGCCAAGCTCTTCTAGCATGGAAGAACAGTTTGAACAGCACAGCAGATGCATTAGCATCATGGAATTCTTCAGACTCAAGTCCATGCAGCTGGTTTGGTGTGCACTGCAACTTAGAAGGAGATGTGGTGGAGATAAACTTGAAAGCACTGGATTTGCAGGGCTCATTGCCTTCAAATTTTGGGACTCTCCAGTCCTTGAAGATTCTTGTTGTCTCATCAACCAATATCACAGGCACAATCCCAAAAGAAATTGGAGACTATCAAGAGCTCATTTTTGTTGATCTCAGTGATAATTCTCTTTCGGGTGAAATCCCAGAAGAAATCTGCAGGCTTAGCAAACTGCAAAGTTTATCTCTTCACACCAACTTCCTTCAAGGGAATATTCCATCCAGCATTGGAAACTTGTCAAGCCTTGTCAATTTGACACTCTATGACAACCAATTCAGTGGTGAAATTCCAAAGAGTACTGGGACCTTAAGCAAGCTCCAAACTTTCAGAGCAGGTGGGAATCAAAATCTTAAGGGTGAGCTGCCATGGGAGATTGGACACTGCACCAACTTGGTTATGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGTCTTCCTTCATCAATTGGAATGCTAAAAAGAATCCAAACCATAGCCATTTACACAACTCTTTTGTCAGGCTCTATCCCAGAAGAGATTGGGAATTGCAGTGAGCTGCAGAACCTATACTTGTATCAGAACTCAATCTCAGGTTCAATCCCAAGACAAATTGGAGAGCTCAGAAAGCTTCAGAGTCTCCTTCTATGGCAAAACAGTATCGTGGGCACCATCCCTGATGAGCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTATCAGAAAACCTTCTCACCGGTAGCATACCAAGGAGTTTTGGGCAGCTTTCAAATCTTCAAGTGCTTCATCTTAGTGTTAATCAGTTGTCAGGTATTATACCTCCTGAAATCACAAACTGCACTTCCCTGATTCAGCTTGAATTTGACAACAATGCCATTTCTGGTGAGATTCCTCCCCTTATAGGCAACTTGAAAAGCTTGACTCTGTTCTTTGCCTGGCAGAACAAGCTGACAGGAAAAATCCCAGAAAGCCTGTCAGAGTGCCAGAATCTTGAGGCACTTGATCTTTCCTACAACAATTTATTTGGTCCAATACCCAAACAACTACTTGGGTTGAGAAATCTCACAAAACTTTTGCTTATTTCTAATGATTTATCAGGCTTTATACCACCTGATATAGGCAACTGCATAAGCCTCTACAGGTTAAGATTGAACCACAACAGATTGGCAGGTAGCATTCCATCTGAGATTGGAAGCTTGAAGAATTTGAACTTTGTAGATTTGAGCAGCAATCATCTTGTTGGAGAGATCCCTTCAACATTATCTGGTTGTAAAAACCTTGAGTTTTTGGATCTTCACTCGAATAGTCTCACAGGTTCTGTACCAGAGACTCTTCCTAAAAGCCTCCAGTTATTAGACTTGTCAGACAACAGGCTAACGGGTGCGCTGAGCCATACCATTGGCTCATTAACAGAATTAACCAAACTCAACCTGGGAAAGAATCAGCTCAATGGAAGAATCCCTTCAGAGATCCTTTCTTGCTCTAAGCTACAACTTTTAGACTTAGGAAGCAATGCTTTTTCAGGAGAAATTCCCGGGGAAGTTGGTCAAATCCCTTCTTTAGAAATCTCTCTCAATCTTAGCTGCAACCAATTTTCTGGTGAAATCCCATCCCAGTTCTCTGGTCTTAGCAGAGTAGGAGTGCTTGATCTCTCCCACAACAAGCTTTCAGGGAACTTAAACTCTCTCTCAGACCTTCAGAACCTTGTGTCCTTGAATGTTTCATTCAATGACTTCTCTGGTGAATTGCCAAACACTCCATTCTTCAGAAAACTCCCTCTCAGTGATCTCGCTGCAAATGAAGGCCTCTACATCGCCGATGGTGTTGTAACACCAGCAGACAGAATGGGACCCAATGGTCAAGCCAAATCAGCCATGAAATTCATAATGTCCATCCTCTTAAGCACCAGTGCAGTGCTAGTATTCCTCACAATGTACATCTTGGTTCGAGCTCACATGTCCAATAGAGAACTCATGGAAAATGACACTTGGGAAATGACCTTGTATCAGAAGCTTGAGTTCTCCATTGATGACATCGTCAGAAACTTGACTTCAGCCAATGTCATTGGCACGGGAAGCTCTGGAGTTGTGTACAAGGTGATGATCCCAAGTGGCGAAACACTAGCAGTGAAGAAGATGTGGTCATCAGAAGAGTCAGGAGCATTCAGCTCAGAAATTCAAACACTAGGTTCAATCAGACACAAAAGCATCATTAGGCTTCTGGGTTGGGGATCCAATAAGAGCCTCAAGCTGCTGTTTTATGATTATCTCCCTAATGGAAGCTTGAGCTCACTGCTTCATGGTTCAGGAAAAGGAGTAGAATGGGAAGCTAGATTTGATGTTATTTTAGGTGTGGCACATGCACTTGCATATTTGCACCATGATTGTGTGCCTGCAATATTGCATGGAGATGTCAAAGCCATGAATGTGCTATTGGGTCCTGGAAATCAACCTTACCTTGCTGATTTTGGCCTTGCGAGAATTGCAAATGAGAATAGTGATGACCCTACAAATTCCAAGCCAGTTCAGAGACCTTACCTTGCTGGTTCCTATGGATACATGGCTCCTGAGCATGCATCAATGCAGAGGATCACTGTGAAGAGTGATATTTACAGTTTTGGTGTAGTTCTTCTTGAGGTCTTGACAGGGAAGCACCCACTGGATCCAACTTTACCAGGTGGTGCACACTTGGTTCAGTGGGTTAGGAACCATTTGGCTAGCAAAGGAGACTCATCTGACATCCTTGACCAAAAGCTGAGGGGAAGAGCTGACCCTACCATGCATGAAATGTTACAAACTCTTGCTGTATCATTTCTCTGTATCAGCACAAGAGCTGATGAGCGTCCAACGATGAAGGACGTGGTTGCAATGCTCAAGGAAATTAGACCTGATGAGGCCTCAAGAGCTGACCCTGACCCTGAGTTTCTCAAGGGAGGTTTACAAGCACATAGCTCTCCACCGCCACCTAAGAATGCAGCTTCACATGGTTCTTCTAACTGCTCCTTTAATTTCTCATCAGACGATTCAATCTGCTGA 3291 0.4321 MPASLRNLSLSPKIFSFTLLLSINTLLFSCCYSINEQGQALLAWKNSLNSTADALASWNSSDSSPCSWFGVHCNLEGDVVEINLKALDLQGSLPSNFGTLQSLKILVVSSTNITGTIPKEIGDYQELIFVDLSDNSLSGEIPEEICRLSKLQSLSLHTNFLQGNIPSSIGNLSSLVNLTLYDNQFSGEIPKSTGTLSKLQTFRAGGNQNLKGELPWEIGHCTNLVMLGLAETSISGSLPSSIGMLKRIQTIAIYTTLLSGSIPEEIGNCSELQNLYLYQNSISGSIPRQIGELRKLQSLLLWQNSIVGTIPDELGSCTELKVIDLSENLLTGSIPRSFGQLSNLQVLHLSVNQLSGIIPPEITNCTSLIQLEFDNNAISGEIPPLIGNLKSLTLFFAWQNKLTGKIPESLSECQNLEALDLSYNNLFGPIPKQLLGLRNLTKLLLISNDLSGFIPPDIGNCISLYRLRLNHNRLAGSIPSEIGSLKNLNFVDLSSNHLVGEIPSTLSGCKNLEFLDLHSNSLTGSVPETLPKSLQLLDLSDNRLTGALSHTIGSLTELTKLNLGKNQLNGRIPSEILSCSKLQLLDLGSNAFSGEIPGEVGQIPSLEISLNLSCNQFSGEIPSQFSGLSRVGVLDLSHNKLSGNLNSLSDLQNLVSLNVSFNDFSGELPNTPFFRKLPLSDLAANEGLYIADGVVTPADRMGPNGQAKSAMKFIMSILLSTSAVLVFLTMYILVRAHMSNRELMENDTWEMTLYQKLEFSIDDIVRNLTSANVIGTGSSGVVYKVMIPSGETLAVKKMWSSEESGAFSSEIQTLGSIRHKSIIRLLGWGSNKSLKLLFYDYLPNGSLSSLLHGSGKGVEWEARFDVILGVAHALAYLHHDCVPAILHGDVKAMNVLLGPGNQPYLADFGLARIANENSDDPTNSKPVQRPYLAGSYGYMAPEHASMQRITVKSDIYSFGVVLLEVLTGKHPLDPTLPGGAHLVQWVRNHLASKGDSSDILDQKLRGRADPTMHEMLQTLAVSFLCISTRADERPTMKDVVAMLKEIRPDEASRADPDPEFLKGGLQAHSSPPPPKNAASHGSSNCSFNFSSDDSIC 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00980 1096 FunFam Leucine-rich receptor-like protein kinase family protein 34 192 - -
Bach3g00980 1096 SMART serkin_6 768 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00980 1096 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 193 284 - -
Bach3g00980 1096 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Bach3g00980 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Bach3g00980 1096 SUPERFAMILY Protein kinase-like (PK-like) 752 1043 IPR011009 -
Bach3g00980 1096 FunFam Leucine-rich receptor-like protein kinase family protein 336 608 - -
Bach3g00980 1096 Pfam Protein kinase domain 771 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00980 1096 SUPERFAMILY RNI-like 286 662 - -
Bach3g00980 1096 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 295 1038 - -
Bach3g00980 1096 Gene3D Ribonuclease Inhibitor 369 608 IPR032675 -
Bach3g00980 1096 Pfam Leucine Rich Repeat 415 436 IPR001611 GO:0005515
Bach3g00980 1096 SUPERFAMILY L domain-like 32 307 - -
Bach3g00980 1096 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 842 1059 - -
Bach3g00980 1096 SMART LRR_sd22_2 389 412 - -
Bach3g00980 1096 SMART LRR_sd22_2 269 295 - -
Bach3g00980 1096 SMART LRR_sd22_2 628 653 - -
Bach3g00980 1096 SMART LRR_sd22_2 148 174 - -
Bach3g00980 1096 SMART LRR_sd22_2 531 557 - -
Bach3g00980 1096 SMART LRR_sd22_2 317 346 - -
Bach3g00980 1096 SMART LRR_sd22_2 413 439 - -
Bach3g00980 1096 ProSiteProfiles Protein kinase domain profile. 768 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00980 1096 Gene3D Ribonuclease Inhibitor 191 288 IPR032675 -
Bach3g00980 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 609 694 - -
Bach3g00980 1096 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Bach3g00980 1096 Gene3D Ribonuclease Inhibitor 34 190 IPR032675 -
Bach3g00980 1096 Gene3D Ribonuclease Inhibitor 609 692 IPR032675 -
Bach3g00980 1096 Pfam Leucine rich repeat 609 664 IPR001611 GO:0005515
Bach3g00980 1096 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Bach3g00980 1096 SMART LRR_typ_2 437 461 IPR003591 -
Bach3g00980 1096 SMART LRR_typ_2 293 317 IPR003591 -
Bach3g00980 1096 SMART LRR_typ_2 341 365 IPR003591 -
Bach3g00980 1096 SMART LRR_typ_2 148 172 IPR003591 -
Bach3g00980 1096 SMART LRR_typ_2 510 532 IPR003591 -
Bach3g00980 1096 SMART LRR_typ_2 555 579 IPR003591 -
Bach3g00980 1096 SMART LRR_typ_2 485 509 IPR003591 -
Bach3g00980 1096 Gene3D Transferase(Phosphotransferase) domain 1 842 1059 - -
Bach3g00980 1096 MobiDBLite consensus disorder prediction 1072 1096 - -
Bach3g00980 1096 MobiDBLite consensus disorder prediction 1048 1096 - -
Bach3g00980 1096 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Bach3g00980 1096 Gene3D Phosphorylase Kinase; domain 1 732 841 - -
Bach3g00980 1096 PRINTS Leucine-rich repeat signature 628 641 - -
Bach3g00980 1096 PRINTS Leucine-rich repeat signature 534 547 - -
Bach3g00980 1096 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 737 841 - -
Bach3g00980 1096 Gene3D Ribonuclease Inhibitor 289 368 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00980 Bach-Chr3 20256046 20259445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00980 31 1095 Receptor kinase-like Gene Family AT5G56040 67.784 0.0 1435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach3g00980 Pkinase 3.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00980 - - gmx:100802880 1766.51