Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00950 ATGGATGAGGGTGAGGGAGGGTACGGTGAGAGCGGGGACCCGATGGATCACTTCCATCGCAACGAAGCTATATCAGCTGTTGCCGATGAAGGTTTCTTGGGTGAGGAGGACGATGATTATGAGGATCTTTACAACGATGTTAATGTTGGGGAAGGGTTTCTTCAATCTTTGAGAAAGAACGAGGATTTAGGGTTTAGGAATGATGATGTTGAGGAGAAAAAGGCCCAGTCAACTGTTGTGCCTCCGGAAACCGGTGCTGGGGTTTCGATACCGGGTGTTGGTGGTGGTAGTGTTGACACTGGCGGCAGCGGCGGTGGTGGTGGAGGAGTTGGGGGTATTGATGGTGCGTCCAGGGTTTCTGGGAGAGCAGATGGGTTTCAGAGTCAGGGGTTTAGAGGGAATGAGATAGGTGTGAAGGGGAGTGGTGGATCAGGGTCCTCTATGGGCGGTGGAGGTGGGATTAGGGTTGAATTAGGACAACCATCGGGTAAATTGAATGAGATAGAGGAGCAAAGTGGTAATAATAGTGTGGGAGTGCAAGGGATGGGGCCGCAACCACATGGTGGGGTTGTTGGGAATGTGGTAGGAAATGAGGGCTTGGTGAGACAAGGGGGAGGAGGAAATCTCAACAGGATTGGTGGAAATGGGGTTGGGAATAGTGTGACTGGAGTGAATAGTGTTGGTTCTGGAGGAGTTGTACCAACTGCTGGTGCTGGCAGTGCTGGTGGTACTGGCACTGGAGGAACCATATTGTTTGTGGGGGATCTGCACTGGTGGACTACAGATGCTGAGCTGGAGGCAGAGCTTTGTAAGTATGGAGCAGTGAAGGAGGTGAAGTTTTTTGATGAGAAGGCTAGTGGGAAGTCAAAAGGGTATTGCCAGGTTGAGTTTTATGACCCTTCTGGTGCCACTGCTTGTAAGGAAGGGATGAATGGACATATGTTTAATGGGAGACCGTGTGTTGTTGCTTTTGCTTCACCTTTTACTGTTAAGAGAATGGGAGAGGCTCAGGTGAGTAGGAATCAACAGATGACCCAATCTACAGCTACTCAGGGAAGAAGAGCGCCAGCTGATGCTGGGGCCAAGACTGGTGGGAGCAATATTGCTACAGGTGGTAACTACCAAGGTGGAGATAGCAATAGAGGTTTCGGCAGAGGTAACTGGGGCAGAGGAAATGCTCCTGGGATGGGAAATAGAGGGCCTGTTAATCCAATGAGGAACAGGGCTGGTGGCATGGGTGGTAGAGGAATTATGGGAAACGGTGGGAATGGGTTTGGACAGGGTATTGGTGCTACCCCGCCTATGTTGCATCCTCAGTCAATGATGGGCCAGGGTTTTGATCCTGCATTTGGAGGTCCTATGGGTAGGATGGGAAATTATGGAGGATTTCCTGGTGCTCCAGCACCTCCATTTTCTGGGATTCTGTCTTCATTCCCTCCTGTTGGAGGTGTTGGTTTGCCTGGAGTGGCACCTCATGTTAATCCAGCCTTTTTTGGAAGAGGAATGCCTGTAAATGGCATGGGAATGATGCCCTCGTCAGGTGTTGATGGGCATAATATGGGAATGTGGACAGATCCATCTATGGGTGGATGGGGTGGTGAAGAACCTGGTGGCGGGAGAGCTGGAGAGTCTAGTTATGGGGAGGAAGCTGCATCAGATCATCAGTATGGTGAAGTGAGTCATGATAGAGGTGGATGGCCTAATGCACGGGAAAAAGATAGAGGATCAGAAAGGGACTGGTCTGGTTCTTCTGACCGAAGGTACAGGGATGACAGAGATCAAGGATATGAGAGAGATGCTCCCAGAGAAAAAGATATGGCCCATGACCATGAATGGTCAGAAAGAAGACATCGTGACGATAGAGAAATAGGCCGAGAGCGGGACAGGGAGCGTGACCGTGATCGGGAACGATCTCGAGACCGCGATCGCGACCGTGAAAGGGATCGTGATAGAGACCGTGAGCGTGATAGGTACAGGGAAGACAAGGACAAATATGCTGATCATCCTAGGTACAGAGACCGTGAAACTGACCATGAAGATGAATGGGAAAGGGGACGGTCTTCAAGGACTCACAGCAAGTCCCGATTATCTCAAGAGGAGGAGCATCATTCTAGACCAAGAGATGCTGATTATGGGAAGAGGCGGCGGGTTACCTCTGAGTAA 2163 0.5053 MDEGEGGYGESGDPMDHFHRNEAISAVADEGFLGEEDDDYEDLYNDVNVGEGFLQSLRKNEDLGFRNDDVEEKKAQSTVVPPETGAGVSIPGVGGGSVDTGGSGGGGGGVGGIDGASRVSGRADGFQSQGFRGNEIGVKGSGGSGSSMGGGGGIRVELGQPSGKLNEIEEQSGNNSVGVQGMGPQPHGGVVGNVVGNEGLVRQGGGGNLNRIGGNGVGNSVTGVNSVGSGGVVPTAGAGSAGGTGTGGTILFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDPSGATACKEGMNGHMFNGRPCVVAFASPFTVKRMGEAQVSRNQQMTQSTATQGRRAPADAGAKTGGSNIATGGNYQGGDSNRGFGRGNWGRGNAPGMGNRGPVNPMRNRAGGMGGRGIMGNGGNGFGQGIGATPPMLHPQSMMGQGFDPAFGGPMGRMGNYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPSSGVDGHNMGMWTDPSMGGWGGEEPGGGRAGESSYGEEAASDHQYGEVSHDRGGWPNAREKDRGSERDWSGSSDRRYRDDRDQGYERDAPREKDMAHDHEWSERRHRDDREIGRERDRERDRDRERSRDRDRDRERDRDRDRERDRYREDKDKYADHPRYRDRETDHEDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRVTSE 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00950 720 CDD RRM_CFIm68_CFIm59 251 324 - -
Bach3g00950 720 SUPERFAMILY RNA-binding domain, RBD 245 341 IPR035979 GO:0003676
Bach3g00950 720 MobiDBLite consensus disorder prediction 518 720 - -
Bach3g00950 720 MobiDBLite consensus disorder prediction 338 378 - -
Bach3g00950 720 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 249 327 IPR000504 GO:0003723
Bach3g00950 720 Gene3D - 243 359 IPR012677 -
Bach3g00950 720 MobiDBLite consensus disorder prediction 71 159 - -
Bach3g00950 720 MobiDBLite consensus disorder prediction 554 720 - -
Bach3g00950 720 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 20 654 IPR034772 -
Bach3g00950 720 SMART rrm1_1 250 323 IPR000504 GO:0003723
Bach3g00950 720 MobiDBLite consensus disorder prediction 338 353 - -
Bach3g00950 720 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 251 320 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00950 Bach-Chr3 20056500 20058662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00950 228 325 Eukaryotic Initiation Factors Gene Family AT4G34110 33.000 3.69e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00950 K14398 - qsa:O6P43_021303 883.248