Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00949 ATGGCGGACTCAGACAACGATTCCGGCGGGGCGTATAACACTGGAAACAATGCTCAGGGCAGCGAATTGTCGCCGCGAGAGCAAGACCGGTTTTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCTCTGCCAGCAAATGCGAAGATCTCAAAGGACGCGAAAGAGACAGTGCAAGAGTGTGTTTCCGAGTTCATTAGCTTCATCACAGGCGAGGCCTCCGACAAGTGCCAGAGGGAGAAGCGCAAGACCATCAATGGCGACGATTTGCTCTGGGCTATGACCACCTTGGGATTCGAGGAGTACGTGGAGCCTTTGAAGATTTACTTGCAAAGGTTCAGAGAAATAGAGGGAGAGAAGAGCGTGGCGGCACGTGACAGGGAGGGGGGAGTTGGCGGCAGCGGTGGCGTGGCTGCAGGGAATAGTGGGTACGAGGGTGGTGGGGTATATGGGGGAGGAGGTGGAGCTGGGATGGGGATGATGATTCATCAGGGACACGTGTACGGTTCATCTGGGCTTCATCCGATGGCTGTGAGTGGTGGTGCTGGTGGTTCTGTCATGGGTAAGAGTGGGCCAAGTTATCCTGCTCCTGGATCTAATGCGGGTAGACCCAGATAA 621 0.5523 MADSDNDSGGAYNTGNNAQGSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREIEGEKSVAARDREGGVGGSGGVAAGNSGYEGGGVYGGGGGAGMGMMIHQGHVYGSSGLHPMAVSGGAGGSVMGKSGPSYPAPGSNAGRPR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00949 206 Gene3D Histone, subunit A 20 133 IPR009072 GO:0046982
Bach3g00949 206 SUPERFAMILY Histone-fold 28 128 IPR009072 GO:0046982
Bach3g00949 206 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach3g00949 206 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Bach3g00949 206 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Bach3g00949 206 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Bach3g00949 206 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 126 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach3g00949 206 MobiDBLite consensus disorder prediction 181 206 - -
Bach3g00949 206 MobiDBLite consensus disorder prediction 7 24 - -
Bach3g00949 206 MobiDBLite consensus disorder prediction 1 28 - -
Bach3g00949 206 FunFam Nuclear transcription factor Y subunit B-3 20 140 - -
Bach3g00949 206 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00949 Bach-Chr3 20053243 20053863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00949 1 160 CCAAT-HAP3 Transcription Factor Family AT4G14540 74.375 1.29e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach3g00949 CBFD_NFYB_HMF 2e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00949 K08065 - qsa:O6P43_013552 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g00949 3 20053243 20053863 Bach3g00949 3 20053243 20053863 ECH