Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00943 CTTGCATTTTCCTTCCGGAAACCTCTTGAAAGTCCTGTTCCTCCGGTCTCCTAGTATTGTTCCTTTTTATAAATCATCTTAATGGCCAGCAATGGTGCAAAGGAGCCCTTACTGTCGCGACCACAGGATTCTGAAGGTCAAAATATTAAAAGGCGGTTAAACAGAAGGTATCTTCGCTGTAAAAGTGCTCCTCTTGCAGAATTTGCTCTTCCAGAGAAAAATGGCGTTGGCTCAATTCCACGTTCTCCGTCCATTTTTGGCGATTTACATCCAAGTTTTAGAAAAGTGGCTATATACCTTGCAACGTATTTAGGTGTAGGAGCTGTAATCTTTTATTTTGTTAGGGACCAAATTGAGGGGAAGAAAACTGATGGAATTCTTGATGCTGTATACTTTACAATTGTGACAATGACCACTGTTGGATATGGGGACCTTGTGCCCAATAGTCCCCTTACAAAACTACTCGCCTGTGCTTTCGTCTTCACAGGAATGGCATTGGTTGGACTAATCCTAAGCAAAGCAGCAGACTACCTGGTTGAGAAGCAGGAAGTTTTGCTAGTTAAAGCTCTAAACATGCGCAAAAAACTCGGTGAAACTGACATTATGAAGCAAGTTGAGATCAACAAAACAAGATACAAACTTATTGTTGCTTTTTCCCTTCTTTTGGCACTCATTGTAGCAGGCACAATCTTTTTAGCCACTGTTGAGAAATTAAATATTGTCGATTCCTTCTATTGCGTTTGTTCTACATTCACAACACTGGGTTATGGCGATAAGAGTTTCTCAACTCTAGCAGGAAGAATTTTTGCCGTGTTTTGGATATTGACAGGCACTATTTGTTTGGCTCAGCTTTTCCTCTATGTTGCTGAGCTAAACGCTGAAAGCAGACAAAAGGCACTGGTAAAGTGGGTTCTCACTAGGAAGATAACCTATCTAGATTTGGAGGCAGCTGATCTTGATGATGATGGAACAGTGGGGGCTGCTGAATTTGTTATCTATAAGCTGAAAGAGATGGGAAAAATAAGTGAAGATGATATCTCAGTTATATTGCAGGAGTTTGAAGAGCTTGATGTTGATCAATCTGGTAGCCTGTCAATTTCTGATGTAGCACTTGCTCAGTCATCTTAGATACACCAATATACACTACACATACAGCGAAAGTCTTCATGAGTAGCTCTCACATGCAGAGTGGTTTTGCAACTTGCTTGTAAATTAGTTCTATCTATTGTTGCTTACTGATGATGTCATAATTTTACCACACACCGTGTAACTTTGGAATCCCTCATGATGTAAAATTTTCTCCATCACAGATTAAGTTATTTTGGAGCGAGCAGATTGAACTAAAA 1346 0.3997 MASNGAKEPLLSRPQDSEGQNIKRRLNRRYLRCKSAPLAEFALPEKNGVGSIPRSPSIFGDLHPSFRKVAIYLATYLGVGAVIFYFVRDQIEGKKTDGILDAVYFTIVTMTTVGYGDLVPNSPLTKLLACAFVFTGMALVGLILSKAADYLVEKQEVLLVKALNMRKKLGETDIMKQVEINKTRYKLIVAFSLLLALIVAGTIFLATVEKLNIVDSFYCVCSTFTTLGYGDKSFSTLAGRIFAVFWILTGTICLAQLFLYVAELNAESRQKALVKWVLTRKITYLDLEAADLDDDGTVGAAEFVIYKLKEMGKISEDDISVILQEFEELDVDQSGSLSISDVALAQSS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00943 348 SUPERFAMILY Voltage-gated potassium channels 175 285 - -
Bach3g00943 348 SUPERFAMILY EF-hand 287 343 IPR011992 -
Bach3g00943 348 PRINTS Two pore domain K+ channel signature 108 136 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bach3g00943 348 PRINTS Two pore domain K+ channel signature 225 234 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bach3g00943 348 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bach3g00943 348 FunFam Two-pore potassium channel 1 167 275 - -
Bach3g00943 348 FunFam Calcium-activated outward-rectifying potassium channel 1 63 158 - -
Bach3g00943 348 Pfam Ion channel 193 264 IPR013099 -
Bach3g00943 348 Pfam Ion channel 72 152 IPR013099 -
Bach3g00943 348 SUPERFAMILY Voltage-gated potassium channels 66 167 - -
Bach3g00943 348 Gene3D - 63 157 - -
Bach3g00943 348 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Bach3g00943 348 ProSitePatterns EF-hand calcium-binding domain. 291 303 IPR018247 -
Bach3g00943 348 Gene3D - 168 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00943 Bach-Chr3 20027907 20030177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00943 53 348 Ion Channels AT5G55630 64.548 1.69e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00943 K05389 - gmx:100777388 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g00943 3 20027907 20030177 Bach3g00943 3 20027907 20030177 ECH