Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00935 ATGGAGATATGGGTTTTCCGAGTTCTGGTCTTGTTTGTTTTGGTTTTCTTCATGTTCGCTGAGGTGAATTTAGCAGAGGGTGGCAATGCCCATGTCAATGCCAGACAATATATCAGTTGGGATGATTTGAAGGTGGATGAGCGTAAGTTGAGGTTGAACACTAACAATGATGGTAGAGTTCTTGTGGTTGATCAGCAAGGCAGGGGACATTCAAGAACTGTTCAAGGAGCTGTGGATATGGTTCCCGATCACAAGAAGGAAAGAGTGAAAATTTACATTTACCCAGGAATTTATAGAGAGAAGGTGTTTGTGCCAAAGAGCAAGCCATATGTCTCGTTTATAGGGAAAAGAGATAAAACAGCAAGAGTAGTCATTACTTGGAACAGCAAGGCTTCAGATAGAAGCTCAAATGGCCAAGAACTGGGAACCTTTGGTTCAGCAACTGTAGGAGTAGAATCAGATTATTTCTGTGCAACTGAGATTACTTTTCAGAACTCTGTAGTTGCAGTGGCTGGTGGGCGTGGAATGCAAGCAGTGGCATTGAGGGTAGACAGTGACAGAGCTGTTTTCTACAGAGTCAACATTCTTGGGACACAGGACACGCTCCTAGATAGCATGGGAACACATTACTTCTACAAATGTTACATCCAAGGAAATGTTGATTTCATATTTGGCAATGCAAAATCACTCTACGAGGACTGTCGTCTCCAATCAACGGCCAAGAGCTATGGAGCAATCGCAGCCCATCACAGGAATTCACCAGATGAAGACACAGGGTTTTCTTTCCTGGGTTGCGAAATCCGAGGAACCGGTACAAATGTCCTGCTGGGAAGAGCTTGGGGGGATTATGCAAGGATAGTCTACTCGTTCTGTTCCATGGATGACATTATTGCCAGTGAAGGATGGAGTGAATGGCAGAAACCATCTAGAAAGAAGACGGCGGTGTTCGGAGAATTCCAGTGCCGGGGAAGAGGAGCAGAAAGGAGTGGTAGAGTGCCATGGTCAAAATCTTTTCGCTATGAGGATGCAAGGCCGTTCATCGGCAAAGGTTTCATAAATGGAGACCAATGGCTTAGACTATAG 1083 0.4488 MEIWVFRVLVLFVLVFFMFAEVNLAEGGNAHVNARQYISWDDLKVDERKLRLNTNNDGRVLVVDQQGRGHSRTVQGAVDMVPDHKKERVKIYIYPGIYREKVFVPKSKPYVSFIGKRDKTARVVITWNSKASDRSSNGQELGTFGSATVGVESDYFCATEITFQNSVVAVAGGRGMQAVALRVDSDRAVFYRVNILGTQDTLLDSMGTHYFYKCYIQGNVDFIFGNAKSLYEDCRLQSTAKSYGAIAAHHRNSPDEDTGFSFLGCEIRGTGTNVLLGRAWGDYARIVYSFCSMDDIIASEGWSEWQKPSRKKTAVFGEFQCRGRGAERSGRVPWSKSFRYEDARPFIGKGFINGDQWLRL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00935 360 Pfam Pectinesterase 62 355 IPR000070 GO:0030599|GO:0042545
Bach3g00935 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 49 359 - -
Bach3g00935 360 FunFam Pectinesterase 56 360 - -
Bach3g00935 360 Gene3D - 59 360 IPR012334 -
Bach3g00935 360 SUPERFAMILY Pectin lyase-like 59 358 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00935 Bach-Chr3 19981947 19983480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00935 8 312 Carbohydrate Esterase AT5G55590 55.692 2.97e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00935 K01051 - gmx:100813382 487.648