Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00880 ATGGGAAGGGCCAGAGGAGCCGCGGCAGTTAAACCGGTAGCGGCTGAGGCGGCGGCGATGGCGGTTGAGCTTAATGGATCCGGGGCGAGGACAGTTTTAAAAGAGCCGAAGTACCGGGGTGTCAGGAAGAGACCGTGGGGGAGATTCGCCGCTGAGATCAGAGACCCGTTGAAGAAAGCTCGGGTCTGGCTAGGCACCTTTGACTCAGCCGAAGAAGCAGCTCGAGCCTACGACGCCGCGGCTCGGAACCTCCGTGGACCTAAGGCCAAAACCAATTTCCCTCTATCCCCTTCTCTCTCTCCTTTCTGTTACCATAATAACCAGAACGATCCATTTTTAGATCACCGGTTATACGCCGCCAATGGTGGTTACCAAGAGCACCAGATTAATCCCCAGAGACCCACTTCCAGCAGCATGAGCAGCACTGTCGAGTCCTTCAGCGGGCCACGCCCTCCGTCTACAACTATTCAACCGCCGTCAGCGATGGCCACCACAGTAACCGCACGGAGATACCCTCGCACGCCGCCAGTTGTGCCGGAGGATTGCCATAGTGACTGCGATTCGTCGTCGTCGGTTGTTGACGACGACGGCGATATCGCATCGTCGTCGTTTCGCCAACCGTTGCCGTTCGATCTTAATTTCCCACCGTTGGAAAGTGCTGATTTGGCGGGTGATGATCTACACTGCACCGCGCTCTGCCTCTGA 705 0.5702 MGRARGAAAVKPVAAEAAAMAVELNGSGARTVLKEPKYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARNLRGPKAKTNFPLSPSLSPFCYHNNQNDPFLDHRLYAANGGYQEHQINPQRPTSSSMSSTVESFSGPRPPSTTIQPPSAMATTVTARRYPRTPPVVPEDCHSDCDSSSSVVDDDGDIASSSFRQPLPFDLNFPPLESADLAGDDLHCTALCL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00880 234 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Bach3g00880 234 FunFam Ethylene-responsive transcription factor 2 37 95 - -
Bach3g00880 234 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Bach3g00880 234 MobiDBLite consensus disorder prediction 126 200 - -
Bach3g00880 234 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Bach3g00880 234 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Bach3g00880 234 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Bach3g00880 234 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Bach3g00880 234 MobiDBLite consensus disorder prediction 126 164 - -
Bach3g00880 234 CDD AP2 36 96 IPR001471 GO:0003700|GO:0006355
Bach3g00880 234 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 29 199 - -
Bach3g00880 234 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00880 Bach-Chr3 19539937 19540641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00880 1 234 AP2-EREBP Transcription Factor Family AT3G20310 60.392 8.87e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach3g00880 AP2 4e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01737 12 13341381 13342028 Bach3g00880 3 19539937 19540641 BWGD
Bach3g00880 3 19539937 19540641 Bach3g00880 3 19539937 19540641 ECH