Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00854 ATGTTCTCCTTCACCGTAGCCAGCGGTATTTCTGCAAAATCTTCCCTTTCTAACTCATTTTGCTTCCCTTTCCAATCTAATCAAACTCAATTCTTTCCCTTTATACCCTCACTGAAGAATCCCTCTCGAGCTGTCTCACATGCCCCAATTCATTGTGGTCTTCGTGAACTTCGAGAGCGAATCCAGTCAGTGAAAAGCACGCAGAAAATCACCGAAGCTATGAAGCTTGTTGCGGCTGCCAAGGTTCGACGAGCACAAGAAGCCGTCATCAATGGAAGACCCTTCTCGGAGGCCCTTGTTGACGTCTTGTACAATATCAATGAGCAGCTTCAAGCAGAAGACATAGATGTTCCTTTGACCAACGTTAGACCTGTTCAGAAAGTAGCTCTTGTTGTTGTCACCGGTGATCGAGGTCTTTGTGGTGGTTTCAACAATGCAGTTATTAAAAAAGCTGAGACCCGAATTGAAGAATTGAAGAACCTTGGGTTGGATTACACTGTAATCAGTGTTGGCAAAAAGGGTAATTCGTATTTCAGTCGTAGACCTTATATTCCGGTTGATAGATTTATTGAAAGGGAAAATTTTCCCACCACGAAAGAAGCTCAAGCTATTGCAGATGATGTTTTTGCATTCTATGTTAGTGAAGAAGTTGATAAGGTTGAGCTTATATACACTAAATTTGTGTCATTAGTTAAATCTGATCCTGTGATTCATACATTGCTTCCATTGTCACCCAAAGGAGAGGTTTTTGATGTGAATGGAAATTGTGTTGATGCCATTGATGATGAGTTCTTTAGGTTGACAACTAAGGAAGGGAAGTTGACCGTGGAGAGGGACATTATGAAGAAGAAGATAGCAGAACAGTCGCCCCCTATGTTATTTGAGCAAGACCCTGTTCAGATTCTTGATGCTATGATGCCTCTTTATTTGAATAGTCAGATTTTGAGAGCACTGCAGGAATCAATAGCAAGTGAGCTTGCAGCAAGAATGACTGCCATGTCTAATGCCACTGATAATGCAGTTGAGCTGACGAAGAATCTTTCAGTTGCCTACAATCGGGAACGACAAACAAAAATCACAGGAGAGATATTGGAGATCGTGGCTGGAGCTGAGGCGCTAACACCATTCGATTGTTAA 1137 0.4204 MFSFTVASGISAKSSLSNSFCFPFQSNQTQFFPFIPSLKNPSRAVSHAPIHCGLRELRERIQSVKSTQKITEAMKLVAAAKVRRAQEAVINGRPFSEALVDVLYNINEQLQAEDIDVPLTNVRPVQKVALVVVTGDRGLCGGFNNAVIKKAETRIEELKNLGLDYTVISVGKKGNSYFSRRPYIPVDRFIERENFPTTKEAQAIADDVFAFYVSEEVDKVELIYTKFVSLVKSDPVIHTLLPLSPKGEVFDVNGNCVDAIDDEFFRLTTKEGKLTVERDIMKKKIAEQSPPMLFEQDPVQILDAMMPLYLNSQILRALQESIASELAARMTAMSNATDNAVELTKNLSVAYNRERQTKITGEILEIVAGAEALTPFDC 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00854 378 FunFam ATP synthase gamma chain, chloroplastic 52 119 - -
Bach3g00854 378 Pfam ATP synthase 54 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 NCBIfam ATP synthase F1 subunit gamma 53 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 Hamap ATP synthase gamma chain [atpG]. 51 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 CDD F1-ATPase_gamma 54 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 FunFam ATP synthase gamma chain, chloroplastic 121 244 - -
Bach3g00854 378 Gene3D - 120 244 - -
Bach3g00854 378 Gene3D ATP synthase, gamma subunit, helix hairpin domain 268 373 - -
Bach3g00854 378 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 55 373 IPR035968 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 PRINTS ATP synthase gamma subunit signature 218 235 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 PRINTS ATP synthase gamma subunit signature 320 339 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 PRINTS ATP synthase gamma subunit signature 351 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 PRINTS ATP synthase gamma subunit signature 125 144 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bach3g00854 378 Gene3D ATP synthase, gamma subunit, helix hairpin domain 53 119 - -
Bach3g00854 378 FunFam ATP synthase gamma chain, chloroplastic 270 373 - -
Bach3g00854 378 ProSitePatterns ATP synthase gamma subunit signature. 359 372 IPR023632 -
Bach3g00854 378 PANTHER ATP SYNTHASE GAMMA CHAIN 11 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00854 Bach-Chr3 19378180 19379316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00854 30 373 Primary Pumps ATPases AT1G15700 72.286 4.30e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00854 K02115 - qsa:O6P43_013711 577.785