Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00850 ATGGGTTGCTGTTTAACTAAAGCCAAGGGTTCAGAGCGGGAACACAATGGTTATAGATCAGCTGGAGCTGCTGCAGTGCACCATCCCAAGACCCATGAACCCTTTATCAATCAGTCAAAAGCCCCAGCTCCACAACCTTACCAGTTGCCGGAGAAACATGCTGCACCTCCATCGCCGTGGAAGCCCTCTGTTCCTGCCCCTAGCCCAAAACATGTTAACAAGTCAGATACTATTTTGGGGAAACCATTTGAAGATGTTAAACAGTACTACAGCATTGGGAAAGAATTGGGTAGAGGTCAATTTGGGGTAACTTACCTCTGCACTGAGAATTCAACTGGGAGACGATATGCTTGCAAGTCCATTTCAAAGAGGAAACTTGTTACTAAAGCTGATAGGGAGGATATAAAGAGGGAAATTCAGATTATGCAGCATTTGAGTGGACAACCCAACATTGTTGAGTTCAAAGGTGCTTATGAAGATAAGCAATCAGTTCATCTTGTTATGGAGCTATGTGCAGGTGGGGAGCTATTTGATCGGATTATTGCTAAGGGGCATTACAGTAAAAGGGCTGCAGCTTCAATATGTAGACAAATTGTTAATGTTGTTCATATCTGCCACTTTATGGGTCTGATGCATAGGGATCTGAAGCCCGAGAATTTCCTTTTGTCCAGTAAGGATGAAAAAGCACTTCTGAAAGCTACAGATTTTGGTTTGTCGGTTTTCATCGAAGAAGGAAAGGTGTATCGGGATATAGTTGGGAGCGCTTATTATGTTGCCCCAGAAGTTCTGCGTCGCAGATACGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATTTTGTATATCTTACTCAGTGGTGTACCACCTTTTTGGGCTGAGACTGAAAAGGGAATCTTTGATGCCATATTGGAAGGGCATATTGATTTTGACAGTCCACCATGGCCAACCATATCAAACAACGCCAAGGACCTTATTCGTAAAATGCTGACGCAGGACCCAAAGAAACGCATTACATCTGCTCAGGTTTTAGATCACCCGTGGATTAGAGACGGAAATGCCTCTGATAAGCCAATAGACAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCTATGAATAAACTAAAGAAGCTTGCCCTGAAAGTCATTGCCGAAAATCTTTCTGAGGAAGAGATCCAAGGGCTGAAGCAAATGTTTACAAATATGGACACTGACAGTAATGGTACAATCACCTATGAGGAACTAAGGGCAGGATTGCAAAGACTTGGCTCAAAGCTCACAGAGGCTGAAGTAAAGCAGCTTATGGAAGCCGCTGATGTAGACGGGAACGGCGCAATTGATTACATAGAATTTATCACAGCTACAATGCACAGACATAGGCTAGAAAGAGATGATCATCTTTTCACGGCCTTCCAACATTTTGATAAAGATAACAGTGGGTTTATTACCAGAGATGAACTGGAAACAGCCATGAAAGAATATGGAATGGGTGATGAAGCCACAATCAGGGAAATTATATCAGAAGTTGATACAGATAATGATGGTAGAATCAACTATGAAGAATTCTGTGCAATGATGAGGAGTGGAACCCCACAACAAGGCAAGTTATTCTAA 1614 0.4263 MGCCLTKAKGSEREHNGYRSAGAAAVHHPKTHEPFINQSKAPAPQPYQLPEKHAAPPSPWKPSVPAPSPKHVNKSDTILGKPFEDVKQYYSIGKELGRGQFGVTYLCTENSTGRRYACKSISKRKLVTKADREDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSKRAAASICRQIVNVVHICHFMGLMHRDLKPENFLLSSKDEKALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFDSPPWPTISNNAKDLIRKMLTQDPKKRITSAQVLDHPWIRDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKQMFTNMDTDSNGTITYEELRAGLQRLGSKLTEAEVKQLMEAADVDGNGAIDYIEFITATMHRHRLERDDHLFTAFQHFDKDNSGFITRDELETAMKEYGMGDEATIREIISEVDTDNDGRINYEEFCAMMRSGTPQQGKLF 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00850 537 Pfam Protein kinase domain 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00850 537 SMART efh_1 430 458 IPR002048 GO:0005509
Bach3g00850 537 SMART efh_1 501 529 IPR002048 GO:0005509
Bach3g00850 537 SMART efh_1 394 422 IPR002048 GO:0005509
Bach3g00850 537 SMART efh_1 466 494 IPR002048 GO:0005509
Bach3g00850 537 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Bach3g00850 537 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Bach3g00850 537 MobiDBLite consensus disorder prediction 49 66 - -
Bach3g00850 537 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Bach3g00850 537 SMART serkin_6 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00850 537 SUPERFAMILY EF-hand 386 526 IPR011992 -
Bach3g00850 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Bach3g00850 537 ProSiteProfiles Protein kinase domain profile. 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00850 537 ProSiteProfiles EF-hand calcium-binding domain profile. 498 532 IPR002048 GO:0005509
Bach3g00850 537 Gene3D Transferase(Phosphotransferase) domain 1 176 355 - -
Bach3g00850 537 Coils Coil 412 432 - -
Bach3g00850 537 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Bach3g00850 537 CDD STKc_CAMK 90 347 - -
Bach3g00850 537 FunFam calcium-dependent protein kinase 1 176 355 - -
Bach3g00850 537 ProSitePatterns EF-hand calcium-binding domain. 510 522 IPR018247 -
Bach3g00850 537 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Bach3g00850 537 MobiDBLite consensus disorder prediction 1 77 - -
Bach3g00850 537 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Bach3g00850 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 84 522 - -
Bach3g00850 537 FunFam Calcium-dependent protein kinase 1 92 175 - -
Bach3g00850 537 Gene3D - 356 529 - -
Bach3g00850 537 FunFam Calcium-dependent protein kinase 1 355 530 - -
Bach3g00850 537 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Bach3g00850 537 Gene3D Phosphorylase Kinase; domain 1 92 175 - -
Bach3g00850 537 CDD EFh 395 454 IPR002048 GO:0005509
Bach3g00850 537 Pfam EF-hand domain pair 395 455 IPR002048 GO:0005509
Bach3g00850 537 Pfam EF-hand domain pair 465 527 IPR002048 GO:0005509
Bach3g00850 537 CDD EFh 466 527 IPR002048 GO:0005509
Bach3g00850 537 SUPERFAMILY Protein kinase-like (PK-like) 89 368 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00850 Bach-Chr3 19348362 19351268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00850 1 533 EF-hand Containing Proteins AT3G20410 74.583 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach3g00850 Pkinase 3.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00850 K13412 - gmx:100798651 919.842