Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00849 ATGCCTATTATCAACGCTTTCCTAACTATGATGAAGTGGTTCACTGGAATGATAGAAGCAGCATGGAGGCCTAAGGAGATTGTTTCGTTCTGGGTTTCTGCTGTCATTCACAATGCTCTTGTTGGGGTACTCATGAAATCTTTGGATAGAATTCTTTTTGCTGTATTTACTTGCTTTCTGGCACTAGGAGGGTCAGTTATGGGAACTATTATAGGAGGCATTAAGGGTCAGACCTCAGAAGCTGGTTTTCTTGATGGGGCTGGAAAAGGAGCTGTCACAGGAGCCATTGCAGCTCTTGAATTGCTCGATTATGAGGATGGGGATGAGCCATTGTCTATGGTTGCCCTAATAGGCAGTTTACTGAATGGGAAAGTATTTATGGAATGGGTGTGTCCAGCAGTTGCACATTCCTATCAGTGGCATATCAACACACCAGAAACAATTTACAGAGAAGTATCAGACATATTTGATATCAAGGGAGTTCCAGGGTTGTCCCAGAACTTTATACAAAAACTTGGTGTTCATCACTTCCACCCCAGCAAAATGTTCAAGTTATACAATGACTCGTGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGGAGAAATGCTGAGGACACTTCCCAAATGTGGCCACTTTTTTCACTCAAGCTGCATAGATAAATGGCTAATTCAACAGGGAACTTGCCCAATGTGTAGAACTTGTGTTCATGATCACATTCATGAATGTTAA 732 0.4208 MPIINAFLTMMKWFTGMIEAAWRPKEIVSFWVSAVIHNALVGVLMKSLDRILFAVFTCFLALGGSVMGTIIGGIKGQTSEAGFLDGAGKGAVTGAIAALELLDYEDGDEPLSMVALIGSLLNGKVFMEWVCPAVAHSYQWHINTPETIYREVSDIFDIKGVPGLSQNFIQKLGVHHFHPSKMFKLYNDSCCSICFQDFEDGEMLRTLPKCGHFFHSSCIDKWLIQQGTCPMCRTCVHDHIHEC 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00849 243 ProSiteProfiles Zinc finger RING-type profile. 191 233 IPR001841 -
Bach3g00849 243 Pfam Ring finger domain 191 233 IPR001841 -
Bach3g00849 243 SMART ring_2 191 232 IPR001841 -
Bach3g00849 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 238 IPR013083 -
Bach3g00849 243 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 42 235 IPR044523 -
Bach3g00849 243 SUPERFAMILY RING/U-box 183 238 - -
Bach3g00849 243 CDD RING-H2_EL5-like 190 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00849 Bach-Chr3 19334126 19335566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00849 18 233 C3H Transcription Factor Family AT5G66070 34.649 2.30e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00849 - K19041 gmx:100305612 290.426