Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00845 ATGGTGAAGCAAGATGATACCAGAGGGAAGACCATCACTTGCAAAGCTGCGGTGGCGTATGGTCCCGGAGAGCCATTGGTGGTGGAGCAAATTCAAGTTCATCCTCCCCAGAAAATGGAGGTCAGAATCAAGATCCTCTTCACTTCAATCTGTCACACCGATCTCAGCGCTTGGCAAGGCGAGAGCGAGGCACAGCGTGCTTATCCTCGAATTTTTGGCCACGAAGCTTCTGGAATCGTTGAGAGCGTGGGAGAAGGCGTGGAGGAGCTGAAAGAAGGAGACTACGCGGTGGCGATATTCAACGGAGAGTGTGGGGACTGCGGGTACTGCAACCGCGAGGAAACAAACAAGTGCGAGAATTATGGGGTGAACCCAATGAAGACGGTGATGGTTAGCGACGGAAAATGCCGGTTCGCCACCATGGACGGCAGGCCCATATACCATTTCCTGAACACCTCGACTTTCAGTGAGTACACAGTTTTGGACTCAGCCTGCGTCGTCAAACTTCCCACTGTCACAGACGTTGACCTCAAGAAGCTGACCTTGCTAAGTTGCGGTGTCTCAACTGGTGTTGGAGCTGCGTGGAATACAGCGAACGTGGGTGCCGGTTCAAGCGTAGCTGTCTTTGGTCTGGGCGCTGTGGGGCTGGCTGTTGCGGAAGGAGCAAGAGCCAGAGGTGCATCCAAAATAATAGGGGTCGACATCAATCCTGAAAAATTTGTCAAAGGGAGATCAATGGGAATCACGGACTTCATTAATCCAAGAGATGAAGAGAAAGCTGTATACGAGAGAATAAGGGAAATGACTGGAGGAGGAGGCGTAGACTATAGCTTTGAATGTGTGGGAAACGTCGACGTTCTACGCGATGCCTTTTTGTCTGCACATCAGGGTTGGGGATTAACCGTTGTATTGGGGATTCATCCATCGCCAAGAATGCTTCCCATCCATCCAATGGAGTTGTTTGATGGGCGTAGAATAGTGGGATCAGTGTTTGGAGGCTTCAAAGGGAAAACCCAATTGCCTCACTTTGCCAAACAATGCATGCAGGGAGTGGTGAAGCTGGACGAGTTCATCACTCATGAGCTTCCCTTCGAGCAGATAAACAAAGCCTTTGAGCTTCTGTTTCTCCACCTCTCGGCTGGTTGGCAGCCAGCAGCATCTGCATTACTACATCCAGCTCTCGTCTCGTATATCTTTCTTCTTCTCTGTCCAATCCTACCAAAACCAAGTTTCTACTCTCTGTTTATACAAGCTTTCTTGCTTCTTTTCCCCAAACTCAGACATATTGTTACATCCAAGCCCTCCATGAACTTGTTGAACAAACTTGGATTTAGTAGCCCTAGAGCCCCCGAGAATACAGATTACTCAATTGCTCAGGGTCCAGATAATGACATACCTGCACCAGGTCAGCAGTTTGCGCAGTTCGGTGCAGGCTGCTTTTGGGGTGTTGAATTGGCCTTCCAGAGGGTGCCAGGGGTGACAAAGACAGAGATTGGGTACAGCCAGGGATTTTTACACAATCCAAGCTATGAAGATGTGTGTACAGGGACCACAAACCACTCAGAGGTTGTGAGGGTTCAGTATGATCCCAAAGAATGCAGCTATGAGTCATTGCTTGATTTGTTCTGGGCTAGGCACGACCCTACCACACTGAATCGACAGGGAAATGATGTGGGAACACAATACAGATCTGGAATATACTATTACACGCCGGAGCAAGAGAAAGCAGCCAAAGAGTCTTTGGAACAGGAACAGAAGCAGTCAAGCAGGAAGATTGTGACAGAGATTCTTCCTGCGAGGAAGTTCTACCGCGCAGAAGAATATCATCAACAGTATCTTGAGAAAGGGGGCCGCTTTGGTTTTAAGCAGTCGGCAGCCAAAGGATGCAATGATCCAATCCGATGCTATGGCTAAATTTGTTTCCTTTCTAATGTCTTCATCTCGTACTGTAATTATTATTTCTTTGAAAAAGTATATGCATGATAAATGGTGAATAGTGCCTGAGATGGTTGATGATATCCATTATTGCTAATGTTATGGACATCAAGTCCCCACTGAACATGGGTACTCTGTA 2074 0.4793 MVKQDDTRGKTITCKAAVAYGPGEPLVVEQIQVHPPQKMEVRIKILFTSICHTDLSAWQGESEAQRAYPRIFGHEASGIVESVGEGVEELKEGDYAVAIFNGECGDCGYCNREETNKCENYGVNPMKTVMVSDGKCRFATMDGRPIYHFLNTSTFSEYTVLDSACVVKLPTVTDVDLKKLTLLSCGVSTGVGAAWNTANVGAGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINPEKFVKGRSMGITDFINPRDEEKAVYERIREMTGGGGVDYSFECVGNVDVLRDAFLSAHQGWGLTVVLGIHPSPRMLPIHPMELFDGRRIVGSVFGGFKGKTQLPHFAKQCMQGVVKLDEFITHELPFEQINKAFELLFLHLSAGWQPAASALLHPALVSYIFLLLCPILPKPSFYSLFIQAFLLLFPKLRHIVTSKPSMNLLNKLGFSSPRAPENTDYSIAQGPDNDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEIGYSQGFLHNPSYEDVCTGTTNHSEVVRVQYDPKECSYESLLDLFWARHDPTTLNRQGNDVGTQYRSGIYYYTPEQEKAAKESLEQEQKQSSRKIVTEILPARKFYRAEEYHQQYLEKGGRFGFKQSAAKGCNDPIRCYG 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00845 637 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 470 627 IPR002569 GO:0008113
Bach3g00845 637 SMART PKS_ER_names_mod 21 340 IPR020843 GO:0016491
Bach3g00845 637 FunFam Alcohol dehydrogenase 6 17 202 - -
Bach3g00845 637 Gene3D Peptide methionine sulphoxide reductase MsrA 455 637 IPR036509 GO:0008113
Bach3g00845 637 PANTHER ALCOHOL DEHYDROGENASE 9 374 - -
Bach3g00845 637 Pfam Alcohol dehydrogenase GroES-like domain 40 127 IPR013154 -
Bach3g00845 637 FunFam S-(hydroxymethyl)glutathione dehydrogenase 190 329 - -
Bach3g00845 637 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Bach3g00845 637 Gene3D - 190 329 - -
Bach3g00845 637 Gene3D - 17 374 - -
Bach3g00845 637 FunFam Peptide methionine sulfoxide reductase 460 637 - -
Bach3g00845 637 Pfam Zinc-binding dehydrogenase 213 334 IPR013149 -
Bach3g00845 637 SUPERFAMILY Peptide methionine sulfoxide reductase 464 626 IPR036509 GO:0008113
Bach3g00845 637 Pfam Peptide methionine sulfoxide reductase 474 615 IPR002569 GO:0008113
Bach3g00845 637 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 350 IPR036291 -
Bach3g00845 637 SUPERFAMILY GroES-like 7 209 IPR011032 -
Bach3g00845 637 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 473 615 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00845 Bach-Chr3 19290170 19296920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00845 40 374 Monolignol Biosynthesis Gene Families AT2G21890 26.331 3.54e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00845 K00001 - gmx:100787307 579.711