Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00838 ATGAGAAGACCCAAATCAAGGGAATTTATCAAGCAACAGCGACTCTCAGAGGAGAATGAAATCAAGCTCTTAAATTCTTGGATTCAATCCCAGCAACCAGACTCAGGCTCCAATCCTATGTCCTTTCCTCCTCTGCCACCCAAGTCTAAAATTGGCCGAGTAGATGACAATTCATATTCGCGCTATGCGGGTGTCACGAGATTCGACCAATTGCCACTTTCTAACAATACCAAGGATGGGCTGCGAGAAGCTAAGTTCGTTGACATGACAGATATACAGAGGGCTTCTCTGCCCCACGCGCTTTGTGGGCGGGATATTCTCGGCGCGGCGAAAACCGGGTCCGGGAAGACCTTAGCTTTCATCCTTCCGGTCCTAGAGAAGTTATATAGAGAGAGATGGGGACCAGAAGATGGGGTAGGCAGCATCATCATAACCCCTACAAGAGAATTAGCCAGTCAACTATTTGATGTTTTGAAATCTGTTGGTAAACGCCATAACTTTAGTGCTGCCCTCCTTATTGGCGGCCGTAAGGACGTTGAAACAGAGAAAGAACGAGTAAATGAGCTGAACATATTGATCTGTACACCTGGTCGGCTTCTACAACATATGGATGAAACTCCAAATTTTGATTGTTCACAGATGCAGATTTTAGTCCTGGATGAGGCAGACCGCATTCTTGACAGTGGATTTAAGAAGGAACTAAATGCCATCATCTCACAGCTCCCAAAGCATAGACAAACCTTGCTTTTCTCAGCAACACAAACAAAGTCCATTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTATCTGAGTGTTCATGAGGAGTCTGTGACTGCCACTCCCACACTCTTGAAGCAAATTGTAATGGCTGTTCCCCTAGATCAGAAATTAGATATGTTGTGGAGTTTCATAAAGTCACATCTTCAATCAAAAATACTAGTTTTTCTTTCTAGTTGTAAACAGGTAAAATTTGTCTTTGAAGTATTTAAGAAACTACACCCTGGCATACCCTTGAAGTGTCTTCATGGGAGGATGAAGCAGGAGAGAAGGATGGCAATATATTCAGACTTTTGTGAGAAGCGGTCAGTTCTCTTTTCAACTGATGTAGCTGCACGAGGCCTTGATTTCAATAAAGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCTGAAAATGTAGCATCTTACATACACAGAGTTGGCCGAACTGCTCGTTACAAGTCTGGGGGGAAGTCAGTTTTATTTTTGATGCCCTCAGAGATGAAAATGCTTGAAAAGTTAGAAGCAGCGAAAGTCCCAGTACGATTTAATAAGCCGAGAAAAGAACTACTGCAACCCGTTTCAGCTTTGTTGGCAGCTTTACTGGTCAAGCATCCAGACCTGCAGTATCGAGCTCAAAGGGCCTTTATCACATATTTGAGATCCATTCATATCCAGAAGGATAAAGAGATATTCGATGTTACAAAGCTTCCCATTGATGAATTTTCAGCATCCTTGGGTCTGCCAATGACCCCCAAAATTCGTTTTCTAAACCAGAAAGTTAAGTCTAAAACTCTGGTAACTCAAGCAACTTTAGCTGAACCAGCAGATTCAGAAAAGGAAAATGTATTAGAGGCTTCAAGTGAGAAGCTAGACACAAGTGGTTCTGAAGAGGAGGAAACAGAGAAGGATCTTCTTTTGGCTAATGATACCTTGAATGAAGGGGAAGGGAAAGCATCTGAGATTGAAGACATCATACCGGCAACTCGGGTTTTGAAGAAAAAGAAGCTGAAGATCAATGTACATAGACCAGTAGGGAGTAGGGTTGTATTTGATGATGAAGGCAACACACTACCTCCACTGGCCAGGATCGCTGATACACAAAGTGACAAGGATACATTCTTGCTTGACCCAGAGGAAAAAGCTAAATACTATAAAAGGATGCGGGAAGAGTTGAAGAAAGCAGACAAAGAGGACAAGCTTGTACAGCGTCAGCGGCGTAGAGAGAAAAGAATAAAGGAGAAGGTGAAGTGGAAGGGTGGGAATGCGGAAGAAGAGGACCACGAAGATGATATTTCTGGGTCAGAAGATGAAACTGCAAATAGACAGCATAAAAGAAGTAAAGTGTATTTTGATTCTGACAGTGACGCTGGAGAGGGAGATACAATCACAGGGAAACAGACTGTTAGTACTGGCTCTGTTACTTTGGAGGAGCAAGAAGCGTTGGCTCTGAAATTGTTAAGTTCGATGCACTCCTAA 2241 0.4311 MRRPKSREFIKQQRLSEENEIKLLNSWIQSQQPDSGSNPMSFPPLPPKSKIGRVDDNSYSRYAGVTRFDQLPLSNNTKDGLREAKFVDMTDIQRASLPHALCGRDILGAAKTGSGKTLAFILPVLEKLYRERWGPEDGVGSIIITPTRELASQLFDVLKSVGKRHNFSAALLIGGRKDVETEKERVNELNILICTPGRLLQHMDETPNFDCSQMQILVLDEADRILDSGFKKELNAIISQLPKHRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPTLLKQIVMAVPLDQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEVFKKLHPGIPLKCLHGRMKQERRMAIYSDFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSGGKSVLFLMPSEMKMLEKLEAAKVPVRFNKPRKELLQPVSALLAALLVKHPDLQYRAQRAFITYLRSIHIQKDKEIFDVTKLPIDEFSASLGLPMTPKIRFLNQKVKSKTLVTQATLAEPADSEKENVLEASSEKLDTSGSEEEETEKDLLLANDTLNEGEGKASEIEDIIPATRVLKKKKLKINVHRPVGSRVVFDDEGNTLPPLARIADTQSDKDTFLLDPEEKAKYYKRMREELKKADKEDKLVQRQRRREKRIKEKVKWKGGNAEEEDHEDDISGSEDETANRQHKRSKVYFDSDSDAGEGDTITGKQTVSTGSVTLEEQEALALKLLSSMHS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00838 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 274 IPR027417 -
Bach3g00838 746 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 66 94 IPR014014 GO:0003724
Bach3g00838 746 MobiDBLite consensus disorder prediction 526 558 - -
Bach3g00838 746 SMART helicmild6 325 408 IPR001650 -
Bach3g00838 746 MobiDBLite consensus disorder prediction 532 558 - -
Bach3g00838 746 Pfam DEAD/DEAH box helicase 90 260 IPR011545 GO:0003676|GO:0005524
Bach3g00838 746 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Bach3g00838 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 424 IPR027417 -
Bach3g00838 746 PANTHER RNA HELICASE 63 570 - -
Bach3g00838 746 SMART ultradead3 85 289 IPR014001 -
Bach3g00838 746 MobiDBLite consensus disorder prediction 689 709 - -
Bach3g00838 746 Pfam Domain of unknown function (DUF4217) 452 508 IPR025313 -
Bach3g00838 746 CDD DEADc_DDX10 77 275 - -
Bach3g00838 746 Gene3D - 283 558 IPR027417 -
Bach3g00838 746 SMART DUF4217_3 447 510 IPR025313 -
Bach3g00838 746 MobiDBLite consensus disorder prediction 29 49 - -
Bach3g00838 746 Gene3D - 50 278 IPR027417 -
Bach3g00838 746 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Bach3g00838 746 Coils Coil 639 659 - -
Bach3g00838 746 Pfam Helicase conserved C-terminal domain 298 407 IPR001650 -
Bach3g00838 746 CDD SF2_C_DEAD 286 417 - -
Bach3g00838 746 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 294 456 IPR001650 -
Bach3g00838 746 MobiDBLite consensus disorder prediction 665 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00838 Bach-Chr3 19240737 19245537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00838 65 429 Eukaryotic Initiation Factors Gene Family AT3G19760 28.919 1.42e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00838 K14776 - gmx:100792106 1208.74