Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00837 ATGATGCAGCAACCTGCACCCGGAGTGGTCCCCCCGATGATGCCGCCCATGTCGTCGATTCAATCGGATCAGCAGAACCAGCAGTACGCGCCAGCCCCGTCGCAGCAACAGTGGATGATGATGCAGACACAACAGCAGCAAGTGCCTCCACCTGCGGGCTGGGCCCCACAATCAGTGCCACCGCCTCAGGCAGCGCAGATGCAGCCGCAGCTGGCGCAGCAATATGCCACCGGGCAGAATGTTAGCTCTGGTGAGATCAGGTCTCTGTGGATTGGCGACTTGCAGCAGTGGATGGATGAAAGCTACCTGATGAGCTGCTTCGCTCATGCTGGCCAGGTAATTTCAGCGAAGGTCATTCGTAATAAGCAGTCTGGCATGGCGGAGGGTTATGGTTTCATTGAGTGTGTAACTCGTGCTGCAGCAGAGACAATCTTGCAGACATACAATGGCACATTGATGCCAAATTCTGATCAATCTTTTAGGTTGAACTGGGCCACGCTTGGTCCTGGTGAGAAGCGACAAGATGATGGTTCAGATTATACAATATTTGTTGGTGATTTGGGTGCTGATGTTACTGATTATGTACTACAAGAAACTTTTCAAGCCCGTTATTCATCAGTAAAGGGAGCAAAGGTGGTCACTGATCGGACCACTGGACGGTCAAAGGGCTATGGATTTGTCAGATTTGGTGATGAAAGTGAACAAGTGCGTGCAATGAGTGAGATGAACGGTCTGTACTGTTCTACAAGACCCATGCGGATTGGACCTGCTGCTAACAAGAAACCCGTAGCTAGCCAGCAATACCAGTCAGTTACATACCAGAATACTCAAGGAAAGCAGGGCGATAATGATCCTAACAATACAACAATATTTGTTGGGAATTTGGACCCTAGTGTCTCAGATGACTTGTTGAGGCAAGTCTTTGGCCAGTTTGGTGAGCTAGTTCATGTGAAAATACCTGCTGGGAAGCGCTGTGGTTTTGTGCAGTTTGCTAATAGATCTTGTGCTGAGCAAGCATTGTCAGTGTTGAATGGAACTCCGTTAGTAGGACAGAGCATCAGACTTTCATGGGGGCGTAGCCCATCAAACAAGCAGTCTCCGACAGATCAAATCCAGTGGAATAGTGCATACTACGGCTATGGTCAAGGATATGATCCTTATACATATGCTCCTACCTCACAAGATCCTAATATGTATTATGGAGGTTACCCTCCTGCTCCATATGGGAACTACCAGCAGCCGCAACAGTGA 1251 0.4892 MMQQPAPGVVPPMMPPMSSIQSDQQNQQYAPAPSQQQWMMMQTQQQQVPPPAGWAPQSVPPPQAAQMQPQLAQQYATGQNVSSGEIRSLWIGDLQQWMDESYLMSCFAHAGQVISAKVIRNKQSGMAEGYGFIECVTRAAAETILQTYNGTLMPNSDQSFRLNWATLGPGEKRQDDGSDYTIFVGDLGADVTDYVLQETFQARYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQVRAMSEMNGLYCSTRPMRIGPAANKKPVASQQYQSVTYQNTQGKQGDNDPNNTTIFVGNLDPSVSDDLLRQVFGQFGELVHVKIPAGKRCGFVQFANRSCAEQALSVLNGTPLVGQSIRLSWGRSPSNKQSPTDQIQWNSAYYGYGQGYDPYTYAPTSQDPNMYYGGYPPAPYGNYQQPQQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00837 416 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 167 IPR000504 GO:0003723
Bach3g00837 416 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 70 371 - -
Bach3g00837 416 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 290 353 IPR000504 GO:0003723
Bach3g00837 416 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 182 248 IPR000504 GO:0003723
Bach3g00837 416 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 155 IPR000504 GO:0003723
Bach3g00837 416 SUPERFAMILY RNA-binding domain, RBD 276 386 IPR035979 GO:0003676
Bach3g00837 416 Gene3D - 167 264 IPR012677 -
Bach3g00837 416 CDD RRM2_SECp43_like 179 258 - -
Bach3g00837 416 Gene3D - 265 369 IPR012677 -
Bach3g00837 416 MobiDBLite consensus disorder prediction 1 71 - -
Bach3g00837 416 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 288 360 IPR000504 GO:0003723
Bach3g00837 416 FunFam Polyadenylate-binding protein RBP45C 170 264 - -
Bach3g00837 416 FunFam Polyadenylate-binding protein RBP45C 265 370 - -
Bach3g00837 416 Gene3D - 86 166 IPR012677 -
Bach3g00837 416 MobiDBLite consensus disorder prediction 17 52 - -
Bach3g00837 416 SUPERFAMILY RNA-binding domain, RBD 166 280 IPR035979 GO:0003676
Bach3g00837 416 FunFam Polyadenylate-binding protein RBP47B 86 166 - -
Bach3g00837 416 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 180 259 IPR000504 GO:0003723
Bach3g00837 416 SMART rrm1_1 181 255 IPR000504 GO:0003723
Bach3g00837 416 SMART rrm1_1 289 356 IPR000504 GO:0003723
Bach3g00837 416 SMART rrm1_1 88 163 IPR000504 GO:0003723
Bach3g00837 416 SUPERFAMILY RNA-binding domain, RBD 53 168 IPR035979 GO:0003676
Bach3g00837 416 CDD RRM1_SECp43_like 88 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00837 Bach-Chr3 19235303 19239601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00837 86 405 Eukaryotic Initiation Factors Gene Family AT2G23350 26.667 1.25e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00837 - - qsa:O6P43_013731 561.222