Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00819 CGGTCCCTGAGTTTCTATCTCAGACTCTGACAAGGGGTATTTGTTTTGTTTTTGGCCCTTTGTGGTTACGTTGGAGTCTTTTCCTTCAATAATTTAGCATCTATTAAGGTTTTTGTTCGTAAAGTTTAGATTTTTCGATTTTATTCAACATGATTTGCTCAGTAAAGCAACCTGGGATAGCGATAAGTGGTTCTGATATTGTTTTTCGGAAAAAGTATGGTAACCCAGTTCAGCAATGGTCGCCTTTACCTTCTCTTCCAAGGGGACAAACCCAGAGATCTCTGGTTTCAGTTCAAAGACCTTTGCACCTGTCTTCTGCTTCTGTTTGGAATTATGTTTCAGTGAAACGAGAAAGAAATTTGGTTGCTTGTGAAGCTTACGAAGCAGACCGATCAGAGCCCATTGAATCACAGGCGCCATCCGAGGCAGCTAAGAAGTTGAAAATTGGAATCTACTTTGCAACCTGGTGGGCTCTGAATGTAGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCGTATCCCTATCCTTGGCTTACTTCAACTCTATCACTTGCATGTGGGTCTCTCATGATGTTGATCTCCTGGGCCACGCGGATAGCTGAGGCTCCAAAGACTGATTTTGAATTTTGGAAGACTTTGTTCCCGGTTGCTGTTGCACATACAATTGGACATGTAGCTGCAACGGTTAGTATGTCGAAAGTTGCAGTTTCATTCACCCATATCATCAAGAGTGGTGAGCCTGCATTTAGTGTGCTGGTTTCAAGATTTATTTTGGGTGAGACATTCCCAGTGCCAGTCTATTTGTCCCTACTTCCGATTATCGGTGGTTGCGCCCTTGCTGCCGTGACTGAGCTCAATTTCAATATGATCGGTTTTATGGGGGCCATGATTTCTAATTTGGCATTTGTATTTCGAAACATTTTTTCAAAGAAGGGGATGAAGGGAAAGTCTGTTAGTGGAATGAACTACTATGCTTGTTTGTCTATGTTGTCTCTCATCATTCTCACGCCATTTGCAATTGCTGTGGAGGGACCGCAGATGTGGGCAGCTGGATGGAAAACAGCCCTTTCTCAAATTGGACCACAATTCATATGGTGGGTGGCTGCTCAGAGCGTGTTCTATCATCTGTATAACCAGGTGTCATACATGTCTCTCGACGAGATCTCTCCATTGACATTTAGCATTGGAAACACCATGAAACGCATATCTGTCATAGTCTCGTCTATCATCATCTTCCACACACCAGTTCAGCCTGTCAATGCTCTAGGAGCCGCCATTGCAATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAGTTTCAAAGCATTGAGAAGGAACTAGATTCTATAAAACATGTGACTGGCTGGATTTCAGTAAGATTAGGATGTCCAACTGTGTGGCCCACCTGTAGATAATAATAATAATGATAATGATAATACTTCGAGTAAACATTATCATTATACTGATGGTTAGCTTAGTTTTTTTTTAATTTTTTTTTCTTGAGTTTTTATCGTTTTTTGCATTTCTGTGAGTTGGAGAAATAAATGTTTTTGTTTAAATAGTCCGAGAATACTATCTCAGAACATTGTTTTGCC 1601 0.4085 MICSVKQPGIAISGSDIVFRKKYGNPVQQWSPLPSLPRGQTQRSLVSVQRPLHLSSASVWNYVSVKRERNLVACEAYEADRSEPIESQAPSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDFEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLIILTPFAIAVEGPQMWAAGWKTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00819 390 Pfam Triose-phosphate Transporter family 97 386 IPR004853 -
Bach3g00819 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 233 - -
Bach3g00819 390 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 97 389 IPR004696 GO:0016020|GO:0022857|GO:0055085
Bach3g00819 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 289 387 - -
Bach3g00819 390 PANTHER SOLUTE CARRIER FAMILY 35 98 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00819 Bach-Chr3 19108129 19111892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00819 1 389 Antiporters AT5G54800 77.307 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00819 K15283 - gmx:100801832 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01489 12 10540951 10544409 Bach3g00819 3 19108129 19111892 BWGD
Bach3g00819 3 19108129 19111892 Bach3g00819 3 19108129 19111892 ECH