Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00802 ATGGAGCTTCCAAGCCAAGCACCAGAGGGATCTTCCAATCAGAAGAAAACGGGAAGAGGGAAAATTGAAATCAAGCGAATCGAGAACACTACGAACAGACAAGTTACCTTTTGTAAGAGACGCAATGGGTTGCTGAAGAAAGCTTATGAATTGTCTGTTCTGTGTGATGCTGAAGTTGCTCTCGTTGTGTTTTCAACCCGTGGACGCTTATATGAGTATGCTAACAACAGTGTTAGAGCAACTATTGAAAGGTACAAGAAAGCATGCGCTGCTTCTTCAAATACAGAATCTGTGGCTGAAGCCAATACACAGTTTTACCAGCGAGAAGCATCCAAATTAAGAAGACAGATCCAAGAGATTCAAAATTTGAACAAGCACATACTTGGTAAAGCTATTAGCACTTTGAGTCTTAAAGAACTAAAGAACCTTGAGGGAAGATTGGAGAAGGGCTTAAGCAGAGTTAGATCCAGAAAGCATGAAACACTGTTTGCTGAGGTCGAGTTCATGCAAAAGAGGGAAATGGAGCTGCAAAACCATAACAATTATCTGCGAGCAAAGATAGCTGAACATGAAAGAGCAAGAGAAGAGCAGCCAAATTTGATGCCCGCAACTGTGTGTGAGTCGATACCACCACAATCATATGACAGAAATTTCTTCCCTGTAAATCTATTAGATTCCACTAATCAATATTCTCGTTCAGACCAGACAGCTCTCCAACTTGTGTAA 726 0.4118 MELPSQAPEGSSNQKKTGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYANNSVRATIERYKKACAASSNTESVAEANTQFYQREASKLRRQIQEIQNLNKHILGKAISTLSLKELKNLEGRLEKGLSRVRSRKHETLFAEVEFMQKREMELQNHNNYLRAKIAEHERAREEQPNLMPATVCESIPPQSYDRNFFPVNLLDSTNQYSRSDQTALQLV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00802 241 Pfam K-box region 101 187 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach3g00802 241 MobiDBLite consensus disorder prediction 1 15 - -
Bach3g00802 241 ProSiteProfiles K-box domain profile. 103 193 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach3g00802 241 CDD MADS_MEF2_like 18 94 IPR033896 GO:0000977|GO:0045944
Bach3g00802 241 MobiDBLite consensus disorder prediction 1 22 - -
Bach3g00802 241 Gene3D - 29 122 IPR036879 GO:0003677|GO:0046983
Bach3g00802 241 PRINTS MADS domain signature 54 75 IPR002100 GO:0003677|GO:0046983
Bach3g00802 241 PRINTS MADS domain signature 39 54 IPR002100 GO:0003677|GO:0046983
Bach3g00802 241 PRINTS MADS domain signature 19 39 IPR002100 GO:0003677|GO:0046983
Bach3g00802 241 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 26 73 IPR002100 GO:0003677|GO:0046983
Bach3g00802 241 FunFam agamous-like MADS-box protein AGL11 29 112 - -
Bach3g00802 241 ProSitePatterns MADS-box domain signature. 19 73 IPR002100 GO:0003677|GO:0046983
Bach3g00802 241 ProSiteProfiles MADS-box domain profile. 17 77 IPR002100 GO:0003677|GO:0046983
Bach3g00802 241 Coils Coil 176 196 - -
Bach3g00802 241 SUPERFAMILY SRF-like 18 92 IPR036879 GO:0003677|GO:0046983
Bach3g00802 241 Coils Coil 103 126 - -
Bach3g00802 241 SMART madsneu2 17 76 IPR002100 GO:0003677|GO:0046983
Bach3g00802 241 PANTHER SERUM RESPONSE FACTOR HOMOLOG 19 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00802 Bach-Chr3 18958062 18963770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00802 15 241 MADS-box Gene Family AT3G58780 69.787 5.04e-113 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach3g00802 K-box 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00802 K09264 - gmx:100792224 402.134