Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00770 ATGACAGAAACCCTACCCTATTCTTTCTGCAGCAGAGGGAGAGTGAGATCAGAGTTCTTCAAGTCGTCTTCTACTCCGAAAATGGTGACTTTCAGGTTCCACCAGTATCAGGTTGTTGGGAGAGCTCTCCCTACTGAAGCAGATGAGCACCCAAAGATTTACCGCATGAAACTTTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGGTATTTTCTGAGGAAACTGAAGAAGGTTAAGAAGAGCAATGGGCAAGTTCTGGCCATCAACGAGATTTTTGAGAAGAACCCTACCAAGATTAAGAACTATGGCATTTGGTTGAGGTACCAAAGTCGAACTGGGTATCACAACATGTACAAGGAGTTCCGTGATACCACTCTAAATGGTGCTGTGGAAGATATGTACAACGAGATGGCTTCACGTCATAGGGTCCGGTTCCCTTGCATTCAGATTATCAAGACTGCCACAGTCCCTGCTAAACTCTGCAAAAGGGAGAGCACCAAACAATTCCACAACTCCAAGATCAAGTTCCCACTGGTTTACAGGAAAGTCAGGCCACCCACAAGGAAGCTGAAGACCACATACAAGGCTTCAAAGCCTAACTTGTTCATGTAATCTGGTTGATCGTGGAGGTATAAGCAAAATTTAGAGTGCCTTTGTTAGTCATTTTTGGTAGAGGTGTTCCTCTTGGTTCCTAATTACCTTCTGTTTTTTGGTTTTGAGAAACCTTAGAACACTGTTATTGGGTTAAAGTCCTTATGTTTCTTTTGGATATGATCTTAATCTTTTATCATTGAGTAGATGTAACAGATTTA 818 0.4303 MTETLPYSFCSRGRVRSEFFKSSSTPKMVTFRFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEDMYNEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYRKVRPPTRKLKTTYKASKPNLFM 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00770 205 PIRSF Ribosomal_L18a 28 205 IPR021138 GO:0003735|GO:0005840|GO:0006412
Bach3g00770 205 PANTHER 60S RIBOSOMAL PROTEIN L18A 29 204 IPR028877 -
Bach3g00770 205 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 34 155 IPR023573 GO:0003735|GO:0005840|GO:0006412
Bach3g00770 205 SUPERFAMILY RplX-like 98 173 - -
Bach3g00770 205 Gene3D - 98 171 - -
Bach3g00770 205 FunFam 60S ribosomal protein L18a 28 98 - -
Bach3g00770 205 FunFam 60S ribosomal protein L18a 99 174 - -
Bach3g00770 205 Gene3D - 22 97 - -
Bach3g00770 205 Hamap 50S ribosomal protein L18Ae [rpl18a]. 33 96 IPR028877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00770 Bach-Chr3 18377653 18379491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00770 22 205 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 90.217 6.71e-124 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00770 K02882 K22683 jre:109014971 361.688