Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00742 ATGAATAGTGGTCTTCCTGATTGGAATTTTGAGAATGATACCTGCATCTCCAATCAAAAGAGGCTCTTTGGGCCGGACCAAGAACTAGTAGAACTTCTATGGCAAAACGGGCAGGTTGTTATGCACAGTCAAACACAAAGCAAACCAATTATGAATTCTATTGACTCAAGACAGTTTCAGAAAAATGCTCAACCAACAATACGGACAAGTGGATCATATGGAAACTCAAGTAATTTGATTCAAGAAGATGAGACAGTCTCATGGATCCAATACCCACTTGAGGATCCACTGGAACATGAATTCTGTTCTAATTTTCTAACGGAGCCACCATCTTGTGAAGCTCACTCTGATAAGCCAATCAAGCAATTTGAAGAAGGAAAGTTTGCCAAATTTGGTGCCCTTAGTACACCCCATGTGAATGCAAGTTCACAACCACCAAATAAAAAACCTTCCTTTGTTCAGGAATTCTCAGGAAATCCCATGCCTGCTCCAAGATTTCATTTACCTGATTCATCCCATACCTGCTCCAAGATTGCACCTCCTAAGGTTGTTTCTGCATCTTCTAATGCACAATTTGGAGAGAAAGGTACTAATAATTTGTTGCAAAGTGAAGCTAAAGAGGGCTCGGTGATGACAGTTGGGTCAAGTCACTGTGGCAGCAATCTAATCCATCAAGACCCAGATGTGAGCAGGGCATCAAGCAATGGTGTTTGGGCTACGGCTTTATCTACTGAGCCTGAACCCTTCAGGGATGATGTGCACATAACAATTCCTCGGAGTGATAAACGGAAATCAGAGACACTTGAACCAACGGTTACTTCATCTTCTGGTGGTTCAGGCAGTAGTCTTGAAAGAACTGGTTGCCAATCTACAAGAGTCCATGGCCAGAAAAGGAAAGAAATAGATGCAGAAGAATCAGAAGAACAAAGTGAGGCCACAGAACTCAAATCAGCAGCTGGAAACAAGTCTTCTCGGCGGACAGGGTCATCCCGAAGGAATCGGGCAGCTGAAGTGCATAATCTCTCAGAAAGGAGACGAAGAGATAGAATCAACGAGAAGATGAGAGCATTGCAACAGCTCATACCTCACAGCAATAAGACTGACAAAGCATCAATGCTGGATGAGGCAATAGAATACTTGAAATCACTTCAGTTACAACTTCAGGTTATGTGGATGGGAACTAGCATGACACCGATGATGTTTCCCGGAATTCAGCACTACATGTCACAGATGGGTATGGGAATGGCTCCACCTTCTTTGCCTCCTATTCAGAATATGATGCATTTACCAAGAGTGCCGCTTGACCAGTCCATAGCTGTGGCTCAGACACCAAACCAGACTGTAATGTCACAAAATCCTGTTTTGGGTCCCTTTAATTACCAAAATCAGATGCAAAATCCTGCTCTTTCAGAGCAATATGCACGTTATATGGGCTATCATCTTATGCAAAGTGCCTCTCAGCCGATGAATGTATTCAGATATGGTCCCCAGGCAGTACAACACAGTCAAGCAATGATTCCGCCCAGCAATAGTAATGAACCCCTGAGTGGATCAGCTAATGCTGACAATGCTGTAAGTGGCAAGATGGGTTAG 1593 0.4344 MNSGLPDWNFENDTCISNQKRLFGPDQELVELLWQNGQVVMHSQTQSKPIMNSIDSRQFQKNAQPTIRTSGSYGNSSNLIQEDETVSWIQYPLEDPLEHEFCSNFLTEPPSCEAHSDKPIKQFEEGKFAKFGALSTPHVNASSQPPNKKPSFVQEFSGNPMPAPRFHLPDSSHTCSKIAPPKVVSASSNAQFGEKGTNNLLQSEAKEGSVMTVGSSHCGSNLIHQDPDVSRASSNGVWATALSTEPEPFRDDVHITIPRSDKRKSETLEPTVTSSSGGSGSSLERTGCQSTRVHGQKRKEIDAEESEEQSEATELKSAAGNKSSRRTGSSRRNRAAEVHNLSERRRRDRINEKMRALQQLIPHSNKTDKASMLDEAIEYLKSLQLQLQVMWMGTSMTPMMFPGIQHYMSQMGMGMAPPSLPPIQNMMHLPRVPLDQSIAVAQTPNQTVMSQNPVLGPFNYQNQMQNPALSEQYARYMGYHLMQSASQPMNVFRYGPQAVQHSQAMIPPSNSNEPLSGSANADNAVSGKMG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00742 530 MobiDBLite consensus disorder prediction 504 523 - -
Bach3g00742 530 MobiDBLite consensus disorder prediction 504 530 - -
Bach3g00742 530 MobiDBLite consensus disorder prediction 269 290 - -
Bach3g00742 530 CDD bHLH_AtPIF_like 335 397 IPR047265 -
Bach3g00742 530 MobiDBLite consensus disorder prediction 249 268 - -
Bach3g00742 530 MobiDBLite consensus disorder prediction 249 349 - -
Bach3g00742 530 SMART finulus 340 389 IPR011598 GO:0046983
Bach3g00742 530 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 334 383 IPR011598 GO:0046983
Bach3g00742 530 PANTHER TRANSCRIPTION FACTOR PIF3 14 507 IPR044273 GO:0003700|GO:0006355
Bach3g00742 530 Gene3D - 329 390 IPR036638 GO:0046983
Bach3g00742 530 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 400 IPR036638 GO:0046983
Bach3g00742 530 MobiDBLite consensus disorder prediction 330 349 - -
Bach3g00742 530 FunFam Basic helix-loop-helix transcription factor 329 392 - -
Bach3g00742 530 Pfam Helix-loop-helix DNA-binding domain 338 384 IPR011598 GO:0046983
Bach3g00742 530 MobiDBLite consensus disorder prediction 291 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00742 Bach-Chr3 18005139 18008193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00742 8 503 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 35.853 4.29e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach3g00742 HLH 2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00742 K16189 - gmx:100784531 704.901