Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00730 TTAAACCCTAATTCTCAAGTAGGGTTTTTCTCTTCTTCAAACACTCTGATACGGTGATACCCTTCCCTCTCTGTATCTTTGGACTCACTGTTCTTATTATACAGAGATGATGAGTGTAATCTTGAGAAAGTCTTCTTTCATAGCTTCAAGGCGTACTCTCGGTGTCTTGTCTGCTATTGAGTCGGTTCTGCACCACCCCCAGCTCAGCTCCTCTGCCGCCTCATCGCTTGCTGGAAATGGTTTGCTTGGTGGTGAGATTGGATCGTTTTCCAACTTTTTGTGGTCCAGTGGCGGCATAGCAAGGGCCTTTCACGGGAAATCTGGGCCCTTGAATTTCCGGGCGTCATTGGTTTCTCAAGCGGGGTTTGCTGTGGCGGATTGCTCCTATGAAGAAGGGCTTAAAGGAGATAGTGATGAAGGCCTTGAGATCGCAAAGCTTGGGATTGCTCAGGAAATTGTTTCTGCTTTGGCCAAGAGAGGTATCACGAAGCTCTTCCCCATTCAGAGGGCTGTGCTGGAACCTGCCATGCAAGGACGTGATATGATCGGTCGAGCAAGGACAGGAACTGGGAAAACCCTTGCTTTTGGGATACCCATCATGGATAAGATCATTCAGTTTAATGCTCAACGAGGACGAGGAAGGAATCCTCTGGCTTTGGCTTTAGCTCCAACCAGAGAACTTGCCCGGCAGGTTGAGAAAGAATTCCAGGAGTCTGCACCCAACTTGGATACAATTTGTGTCTATGGGGGTACACCCATATCTAGCCAAATGAGACAGCTTGACTATGGTGTAGATATTGCAGTAGGCACACCTGGTCGAATTATTGATCTTCTCAACAGAGGTTCTCTAAATTTGAGTGAGGTTCAGTTTGTTGTTCTCGATGAAGCTGATCAGATGCTTCAAGTGGGCTTTCAAGATGATGTGGAGAAAATCTTGGAGAGGTTGCCTCCAAAACGTCAGACCCTTATGTTCTCTGCAACAATGCCATCTTGGATAATGCAGCTCTCCCGCAATTACCTAAATAATCCTCTAACAATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCACTATTCTCAATTGCATCCGATATGCGCACAAAAGCAGGGATTATTGGGCCTCTAGTAACAGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGGCTATCATACGCCATGGCAAGAACCCTTAGATGCGAGGCCTTGCATGGTGATATTTCACAAAATCAGAGGGAAAAAACTCTAGCTGGCTTCAGAAATGGTGAATTCAATGTCTTAGTCGCAACAGATGTTGCTTCACGTGGTCTTGATATACCAAATGTTGATCTTGTAATACATTTTGATCTTCCCAATAATTCTGAGATATTTGTTCATCGATCTGGACGAACGGGTCGGGCTGGGAAGAAAGGAACTGCTATTCTTGTTTATACACAAGATCAATCCAAGACTGTTAGGATTATTGAGCGGGATGTAGGTTGCAGATTTACTGAGCTCCCTAGAATTGCCGTTGATAGTGGATCAGTGGATATGTTTGGTGGAGGCATGGGTGGTGGTCGATTTGGCTCATTTGGAGGCATGAGGGATCGTCGACCTGGTTTTGGCCAGACTGGTGGCTTCGGTCGCTCTGGTTATGGTAATTCTGGTGGATCAAACTCTGGTGACTATGGTTCTTTTGGTCGCTCTGATCAGTCAAGTGGTGGATTTGGCATGAACCGCCCTAGAAATACCAGTGGATCTGGATTTAGTCGATCGGGTGGTTTTGGTAATTCAGATCGTTCTGGTGGTTTTGGAGATTTTGGCTCAAACCAATCTAGCAGTTTTGGTAACAGGAGTTCAGGTCAAAGCAGTACCTTAGGTGGTAATCGTTTTGGCTCTTTGGGGAATGACAAAGGTAATGATTGGAATAATAGGGGAAGGCCATTCTAACTTAATCGTTATGGTGTGCATATGTTTCTCCATTTGACAATTTAGTTCCATGGATCAACATAAGCTCCAAGGGCATGCAGGGATGGTCATGGACTTGACTAGTTTTCTGCACTCTCAAACTGGCATAGTAAATGGCCTACCTATAAACTGGTTCTTGTGCTGTGGTCATGATTCTAAACAAGCATATTCCATTGGCAATTTTGAAGCAGCTTTATGGCGGAATACTAATCCAGTTTAACATGTTTAAATTCCTCTAGAAAAGTTAG 2232 0.4453 MMSVILRKSSFIASRRTLGVLSAIESVLHHPQLSSSAASSLAGNGLLGGEIGSFSNFLWSSGGIARAFHGKSGPLNFRASLVSQAGFAVADCSYEEGLKGDSDEGLEIAKLGIAQEIVSALAKRGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAQRGRGRNPLALALAPTRELARQVEKEFQESAPNLDTICVYGGTPISSQMRQLDYGVDIAVGTPGRIIDLLNRGSLNLSEVQFVVLDEADQMLQVGFQDDVEKILERLPPKRQTLMFSATMPSWIMQLSRNYLNNPLTIDLVGDSDQKLADGISLFSIASDMRTKAGIIGPLVTEHAKGGKCIVFTQTKRDADRLSYAMARTLRCEALHGDISQNQREKTLAGFRNGEFNVLVATDVASRGLDIPNVDLVIHFDLPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSKTVRIIERDVGCRFTELPRIAVDSGSVDMFGGGMGGGRFGSFGGMRDRRPGFGQTGGFGRSGYGNSGGSNSGDYGSFGRSDQSSGGFGMNRPRNTSGSGFSRSGGFGNSDRSGGFGDFGSNQSSSFGNRSSGQSSTLGGNRFGSLGNDKGNDWNNRGRPF 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00730 619 CDD SF2_C_DEAD 347 454 - -
Bach3g00730 619 Gene3D - 329 484 IPR027417 -
Bach3g00730 619 Pfam DEAD/DEAH box helicase 130 297 IPR011545 GO:0003676|GO:0005524
Bach3g00730 619 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 340 484 IPR001650 -
Bach3g00730 619 MobiDBLite consensus disorder prediction 518 610 - -
Bach3g00730 619 SMART helicmild6 365 445 IPR001650 -
Bach3g00730 619 Gene3D - 107 315 IPR027417 -
Bach3g00730 619 Pfam Helicase conserved C-terminal domain 344 445 IPR001650 -
Bach3g00730 619 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 137 311 IPR014001 -
Bach3g00730 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 466 IPR027417 -
Bach3g00730 619 SMART ultradead3 125 328 IPR014001 -
Bach3g00730 619 CDD DEADc 117 312 - -
Bach3g00730 619 FunFam ATP-dependent RNA helicase RhlE 99 314 - -
Bach3g00730 619 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 107 482 - -
Bach3g00730 619 MobiDBLite consensus disorder prediction 500 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00730 Bach-Chr3 17875667 17880667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00730 111 477 Eukaryotic Initiation Factors Gene Family AT3G19760 34.133 2.48e-70 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00730 - - qsa:O6P43_014734 781.171