Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00725 ATGGCTTTCTTCAGAAACTATTCAAATGAAATAGTTTCACATAGTGTCTTGGAAGAAAAAGGCCAAGAACAGAATGCAGATAGAATCCATAGATCACTAGGTAATGAATGTGATGATGCAACCTCCAGTGAGAAGGATATTGATACGAATATGGATGTCCAGTATCAGAGTGATGGTGAACCTGATAGTGCCAATGGACTGCAAAATGAGGCAACAATTGATGATGGAGTTGGGATGAGAGAATCTAACTTGCAGGCTACTGGAAGGAAAACAGCTATGGTTGGAAGGTGGGGTTCAACTTTCTGGAAGGACTGCCAGCCTATGCGTCCTCAGAATGGGTCAGAATCTGGGCAGGAATATAAAAGTGGCTCAGACTATAGAAATGCAGAAGGATCTGAAGATAATTCATCCGAAGGAAGACGGGAAAGATTAGATTTAGAAGATGACGATGAACAAAAGGAATCAGGAAAAGATCCAAGAGGCCACTCTGATGTTCCTGCTGAGGAGATGTTGTCTGATGAATATTATGAGCAGGATGGGGAAGAGCAGAGTGATTCATTGCATTATAGGGGGATTCAACAACCCACTGGATTGAATTCTTGGCCACAACGAATGTCTACAGGTGCCAATAGTCGTGGACGGAGGAATTCTAGGATTTCAGATGATGATGGTGATGATGATAATGGTGATGGTGATGCTGATTATGAAGAAGAGGATGAAGTAGATGAAGATGATCCTGATGATGCAGACTTTGAGCCAGCCATAAGCAATCGTACTGCAAACAAGGATGAAGATTGGGATGGTGGAGATTCAGAAGAAGATGATGAAAGTGATGAGGATATAGAAGTCTTGGATGAGGAAGATTGTTACTACGCAAAGAAACCTAAGGGGAGGCAACGGGGTAAGGTTGGTCAAAGTGTAAAATCTTCTAGAGAACGCCCCAGTCGACAAAGAAAAGTTAAATCATCTTTTGAAGAGGATGAGTCAACAGCAGAGGATTCTGACAGTGAAAGTGACAAGGATTTTAAAAGCATGAAAAAGAGAGGAGTTCAGGTTCGAAAGCATAATGGGCGATCTTCTGCCGCTACAAGTTTTTCTGGGCGGAACAATGAGGTTCGCACTTCTAGTAGGACAGTCAGGAAGGTATCATATGTTGAAAGTGAAGAAAGTGAAGAAGGTGATGAGGGAAAGAAGAAAAAGTCCCAAAAGGAGGAGTTTGAAGAGGAGGATGGTGACTCCATTGAAAAGGTCCTTTGGCATCAACCTAAAGGCATGGCTGAAGAGGCTCAAAGGAATGGTAGATCAACAGAGCCTGTTCTGTTGAGCCACTTGTTTGATTCTGAACCTGATTGGAATGAGATGGAGTTCTTGATTAAATGGAAAGGCCAGTCACATTTGCACTGTCAATGGAAGTCATTTGCTGAGCTGCAAAATCTCAGTGGATTTAAAAAGGTTTTAAATTATACAAAGAAAGTGACAGAGGACATCAGATACAGGATGTCAGTCTCGAGAGAAGAGATTGAGGTCAATGATGTGAGTAAGGAGATGGATTTAGATCTAATCAAGCAAAACAGTCAGGTGGAAAGGGTAATTGCAGATAGGATCAGCAAAGATAACTCTGGCAATGTCATTCCCGAGTACTTGGTCAAATGGCAAGGACTATCATATGCAGAAGCAACATGGGAGAAGGATATTGATATTTCTTTTGCTCAACATGCTATTGATGAGTATAAGGCCCGTGAGGCTGCTATGTCAGTTCAAGGAAAGATGGTAGACCCCCAGCGCAAGAAGAGCAAAGCAAGTTTACGGAAGCTTGATGAACAGCCTGAATGGTTGAAGGGTGGAAAGCTCCGTGATTATCAACTTGAGGGTTTGAATTTTCTTGTTAACAGTTGGAGAAATGACACAAATGTCATTTTAGCTGATGAAATGGGTCTTGGAAAAACTGTTCAGTCAGTATCAATGCTTGGTTTTCTACAGAATGCCCAGCAAATCCATGGTCCTTTTCTTGTTGTTGTTCCATTGTCCACTTTGTCAAACTGGGCCAAAGAATTCAGGAAGTGGCTTCCTGATATGAATATTATTGTGTACGTTGGTACTCGTGCAAGTCGAGAGGTTTGCCAACAGTATGAATTTTATAGTGACAAAAAGGTTGGCAGGCCTATAAAATTCAATGCATTGTTGACTACGTATGAAGTAGTTCTGAAGGATAAGGCTGTTCTCTCCAAAATCAAATGGAACTATCTTATGGTTGATGAGGCTCATAGATTAAAAAATAGTGAGGCACAGTTGTACACGACGCTTTCAGAATTTAGCACCAAGAACAAATTGCTTATCACCGGTACTCCTCTACAGAATAGCGTTGAGGAGCTATGGGCTTTGCTTCACTTCCTTGATCCTGATAAGTTCAAGAGCAAGGATGATTTTGTTCAAAACTATAAGAATCTAAGTTCATTCAATGAAAACGAGCTGGCTAATCTTCATACGGAATTGAGGCCTCACATACTCCGAAGAGTTATTAAGGATGTAGAGAAATCTTTGCCCCCCAAAATTGAGCGTATTCTAAGGGTTGAAATGTCTCCTCTTCAGAAACAGTATTATAAGTGGATTTTGGAACGCAACTTCCATGATTTAAACAAAGGAGTTCGAGGGAATCAGGTTTCTCTTCTTAATATTGTGGTTGAATTGAAGAAGTGCTGCAATCATCCCTTCCTTTTTGAAAGTGCTGACCATGGTTATGGTGGGGACTCAGGAAGTAGTGACAGCAGTAAATTGGAGAGAATTGTCTTTAGCAGTGGGAAGCTTGTCATACTTGATAAACTGCTGGTCAGATTGCATGAGACTAAGCATCGTGTTCTGATTTTCTCTCAGATGGTTAGGATGTTGGATCTACTGGCACAGTATATGTCACTTAGAGGGTTTCAATTCCAGAGGCTTGATGGCAGTACAAAGGCTGAGTTACGGCAGCAGGCTATGGACCATTTTAATGCACCCGGTAGTGATGATTTCTGCTTCCTCCTTTCAACAAGAGCAGGAGGTCTTGGTATCAACCTTGCCACGGCAGACACTGTTATAATATTTGATTCAGACTGGAATCCCCAAAACGATCTTCAGGCAATGAGTAGAGCTCATAGGATTGGGCAACAAGAAGTTGTAAACATCTATAGATTTGTGACAAGCAAAAGTGTTGAGGAGGATATTCTGGAACGAGCTAAGAAGAAAATGGTTCTCGACCATTTGGTGATTCAAAAATTAAATGCAGAGGGTAGATTGGAGAAGAAAGAAGCCAAAAAAGGAAGTTATTTTGATAAAAATGAGCTGTCAGCAATCCTAAGATTTGGAGCAGAGGAGCTTTTTAAGGAGGAGAAAAATGATGAAGAAAGCAAGAAACGACTCTTAAGTATGGATATTGATGAGATACTTGAAAGAGCAGAAAAGGTTGAGGAGAAGGACAATGAGGGAGAACAAGCGCAAGAGTTGTTGAGTGCATTTAAGGTTGCTAATTTTACTAATAATGGTGAGGATGATGGAAGTTTTTGGAGTCGTTGGATAAAACCTGAAGCAGTAACCCAAGCTGAAGAAGCTTTTGCTCCTCGTACTGCAAGGAACATAAAAAGCTATGCAGAGGCTAAGCAATCTGGAAGAACAGGGGCTAATCAATCAGGAAGAAGTAGTAAAAGGAAAAAGAAAGAATCTGAACCTCCTGAGAGAACTCAAAAACGCCGCAAAGCTGAGTATTCAGTTCATGCAGCACCTATGATTGAGGGAGCGTCTGCCCAAGTGAGAGGTTGGTCATATGGGAATTTGTCCAAAAGAGATGCACTGCGTTTTTCTCGTGCAGTTATGAAGTTTGGAAACGAGAGTCAAATTGACTTAATAGCTGCTGAGGTTGGTGGTGCAGTCGGAGCAGCTACTTCTGAAGCACAAACTGAACTCTTCAATGCCTTAATTGATGGCTGTAGAGAAGCAGTGGACCTTGGAAGTATGGATCCAAAGGGGCCTTTGTTGGATTTCTTTGGTGTCCCAGTAAAGGCAAATGATCTCCTAAATCGTGTTCAAGAACTACAACTCTTAGCAAAACGCATTTGTCGGTACGAAGACCCCATTGGACAATTCCGTGTTTTATCATATCTCAAACCTGCCAACTGGTCTAAAGGTTGTGGATGGAATCAAATTGATGATGCTAGATTGCTTCTTGGAATCTATTACCATGGGTTTGGCAACTGGGAAAAGATAAGATTAGATGAAAGGCTTGGCTTGACAAAGAAGATTGCTCCGGTAGAACTTCAACACCATGAAACTTTCTTGCCACGAGCTCCAAATTTGAGAGACCGTGCTAATGCCCTTCTGGAACAAGAACTTGCTGTTCTTGGTGGCAAAAGTCTCAATAGCAAAGTCGGACGTAAGCCTTCCAAGAAGGAGCGAGAACAGCTTATGAACATGCCCTTGCCTCGTGGGCAGGAGAAGAAGGGAATACTAGGTTCTTCTAAAGTTAATACTCGCAAGAGAAAGGATAAACTTCAGAAACCCCAAAGAGTTGAACCTATGGTGAAAGAAGAGGGTGAAATGTCTGACAATGATGAAGTATATGAGCAGTTCAAGGAGGTAAAATGGATGGAATGGTGCGAAGATGTGATGCTTGAAGAAATGAAAACATTGAAACGTCTTCATAGGTTGCAAACAACCAGCGCTAATCTCCCAAAGGAAAAGGTGCTTTCAAAAATCCGCAACTATTTACAACTTCTTGGGCGGAGGATAGATCAAATTGTGTTGGAACATGATGAAGAGCACTATAAACAAGATAGGATGACTACAAGATTGTGGAACTATGTCTCTACCTTCTCCCATCTTTCTGGGGAAAGACTTCGTCAAATTTATTCCAAACTAAAACAAGAGCAAGAAGATGAGGTGGGAGTTGGCCCCTCTCATGTCAATGGGTCGGTATCTGGCCCATTTAGCAGAAATGGTAACCCTAATCCTTTCCCTCGCCATATGGAGCGGCAAAGAGGGTACAAAAATTCAACTACCAACCAAACGCCAGCACCATTTAATCATACAGGAAAATCTAAGGCATGGAAACGAAGAAGAAGAGCTGAAAGTGATAGTAATTTCCAAGGTCCCCCTCCACCTCAAAGGACCATGAGTAATGGAGTCCGAATATCTGATCCCAACTCACTGGGGATTCTTGGGGCCGGACCATCTGACAGACGTTTTGTTAGTGAGAAACCACCTTACAGGATGCGACCTAGTGGGTTTCCTACCAGACAGGGTTTCTCTTCAGATATCAAGTAA 5292 0.4189 MAFFRNYSNEIVSHSVLEEKGQEQNADRIHRSLGNECDDATSSEKDIDTNMDVQYQSDGEPDSANGLQNEATIDDGVGMRESNLQATGRKTAMVGRWGSTFWKDCQPMRPQNGSESGQEYKSGSDYRNAEGSEDNSSEGRRERLDLEDDDEQKESGKDPRGHSDVPAEEMLSDEYYEQDGEEQSDSLHYRGIQQPTGLNSWPQRMSTGANSRGRRNSRISDDDGDDDNGDGDADYEEEDEVDEDDPDDADFEPAISNRTANKDEDWDGGDSEEDDESDEDIEVLDEEDCYYAKKPKGRQRGKVGQSVKSSRERPSRQRKVKSSFEEDESTAEDSDSESDKDFKSMKKRGVQVRKHNGRSSAATSFSGRNNEVRTSSRTVRKVSYVESEESEEGDEGKKKKSQKEEFEEEDGDSIEKVLWHQPKGMAEEAQRNGRSTEPVLLSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKVTEDIRYRMSVSREEIEVNDVSKEMDLDLIKQNSQVERVIADRISKDNSGNVIPEYLVKWQGLSYAEATWEKDIDISFAQHAIDEYKAREAAMSVQGKMVDPQRKKSKASLRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYSDKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNENELANLHTELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDSSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDLLAQYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEEKNDEESKKRLLSMDIDEILERAEKVEEKDNEGEQAQELLSAFKVANFTNNGEDDGSFWSRWIKPEAVTQAEEAFAPRTARNIKSYAEAKQSGRTGANQSGRSSKRKKKESEPPERTQKRRKAEYSVHAAPMIEGASAQVRGWSYGNLSKRDALRFSRAVMKFGNESQIDLIAAEVGGAVGAATSEAQTELFNALIDGCREAVDLGSMDPKGPLLDFFGVPVKANDLLNRVQELQLLAKRICRYEDPIGQFRVLSYLKPANWSKGCGWNQIDDARLLLGIYYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFLPRAPNLRDRANALLEQELAVLGGKSLNSKVGRKPSKKEREQLMNMPLPRGQEKKGILGSSKVNTRKRKDKLQKPQRVEPMVKEEGEMSDNDEVYEQFKEVKWMEWCEDVMLEEMKTLKRLHRLQTTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHDEEHYKQDRMTTRLWNYVSTFSHLSGERLRQIYSKLKQEQEDEVGVGPSHVNGSVSGPFSRNGNPNPFPRHMERQRGYKNSTTNQTPAPFNHTGKSKAWKRRRRAESDSNFQGPPPPQRTMSNGVRISDPNSLGILGAGPSDRRFVSEKPPYRMRPSGFPTRQGFSSDIK 1763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00725 1763 Gene3D - 1352 1457 - -
Bach3g00725 1763 FunFam protein CHROMATIN REMODELING 5 isoform X2 527 579 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 223 250 - -
Bach3g00725 1763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 841 1123 IPR027417 -
Bach3g00725 1763 Gene3D - 608 847 IPR038718 -
Bach3g00725 1763 ProSiteProfiles Chromo and chromo shadow domain profile. 525 589 IPR000953 -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 1224 1246 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 305 327 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 382 414 - -
Bach3g00725 1763 ProSiteProfiles Chromo and chromo shadow domain profile. 412 491 IPR000953 -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 266 286 - -
Bach3g00725 1763 Pfam Domain of unknown function (DUF4208) 1536 1628 IPR025260 -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 1208 1246 - -
Bach3g00725 1763 FunFam Chromo domain-containing protein 1 400 525 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 1633 1763 - -
Bach3g00725 1763 SMART ultradead3 613 812 IPR014001 -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 126 169 - -
Bach3g00725 1763 SUPERFAMILY Chromo domain-like 504 580 IPR016197 -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 103 414 - -
Bach3g00725 1763 Pfam Chromo (CHRromatin Organisation MOdifier) domain 526 580 IPR023780 -
Bach3g00725 1763 CDD SF2_C_SNF 924 1058 - -
Bach3g00725 1763 Pfam Helicase conserved C-terminal domain 934 1047 IPR001650 -
Bach3g00725 1763 Gene3D - 398 525 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 187 214 - -
Bach3g00725 1763 SUPERFAMILY Chromo domain-like 409 492 IPR016197 -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 1704 1722 - -
Bach3g00725 1763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 604 838 IPR027417 -
Bach3g00725 1763 FunFam Chromodomain-helicase-DNA-binding protein 2 isoform 1 848 1078 - -
Bach3g00725 1763 Coils Coil 1130 1150 - -
Bach3g00725 1763 Gene3D - 848 1078 IPR027417 -
Bach3g00725 1763 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 167 1663 - -
Bach3g00725 1763 SMART DUF4208_2 1524 1629 IPR025260 -
Bach3g00725 1763 Gene3D - 527 579 - -
Bach3g00725 1763 Pfam SNF2-related domain 636 905 IPR000330 GO:0005524|GO:0140658
Bach3g00725 1763 Coils Coil 1077 1097 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 105 125 - -
Bach3g00725 1763 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 937 1088 IPR001650 -
Bach3g00725 1763 FunFam Photoperiod-independent early flowering 1 587 861 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 356 381 - -
Bach3g00725 1763 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 629 801 IPR014001 -
Bach3g00725 1763 CDD CD1_tandem 410 490 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 1671 1685 - -
Bach3g00725 1763 CDD CD2_tandem 523 579 - -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 53 80 - -
Bach3g00725 1763 SMART chromo_7 410 493 IPR000953 -
Bach3g00725 1763 SMART chromo_7 523 582 IPR000953 -
Bach3g00725 1763 SMART helicmild6 963 1047 IPR001650 -
Bach3g00725 1763 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00725 Bach-Chr3 17827382 17843305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00725 639 1074 RAD5 or RAD16-like Gene Family AT1G02670 26.535 5.11e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach3g00725 SNF2_N 3.6e-65 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00725 K11367 - gmx:100808039 2816.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g00725 3 17827382 17843305 Bach3g00725 3 17827382 17843305 ECH