Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00661 ATGGATTTTGATCCAGAAAATCAATTTGAAGATGGGTTTGATCAGATTGAAGACAAACAAGGGTCGGATCAAGAAGCGGAGAAGCTGAAAGGATCTTCTGGTGAAGATGAAAACCCTAGGGCTGCAGATGAGGGGACAGTTCAGAACCCAGCTTCAACAATCCGGGTCTGTGACTTCTGTGGCAGGACTTTCAACAACGGAAAAGCTTTGGGTGGACACAGAAGATATCACCTTCAAGTTCTGAAAAAAGAAGTTGCAGCTCAATCCCAAAAGGTAAAAATTCGTCTCCCAAAAGCTGCGATTCATAATAACAATAATTCAAATTGTGTCAATGATGTTGAAGATAATAATAATCTCAAGATGGAAGCTTTGATGTCTAATAATGGAGGAAAAGGGAAACCCACTTGTGATCTTTGCAAGAAGGAGTTCCCATCCATGAAATCCTATTATGGGCACATGAGATCCCACCCAGAGAGGAACAAGAGGGCTGTTTTGCTTCCTCTACCCTGCTCTCCCAAGTCTGCTAATGATTCTGTGGAACAGAAAGAAGATAACTGTGATATTGGTAGGACAGATTTTGCACCAGATGATGATTCACCTATTCATCTGACAAAATCTTTTCCAAGCTGGGCTAAGACTGATCAAAGGGGCAGGAAAAGCATTGGTGGTGCTGAGGCTGCTCAAAATCTAGTGTATCTCTCTCGCGGAGGGTACTTTTCTGCTCCTCAATTAACTCCTGTCGTGTCACCTCAAGCCACGTCCTTTGTTAAGGCGGTTGAGGCCAAGAGTAGTACTTCTGGAGTTGCTCTACAGCTTAAGACAAGCAAGGTTGATGATGATGATTCTCCTTCAAGGAAACAAAAATTGAGGAAGATAAGAGCTTATAGGAGAGGTTCACTGAAGTTGGGTGACAAAATCGATGAGAATGACGATGGCTGTGGCCAGAGTGTGAATGGAGGAAAGGACTTGTCTGAATGTGGGAAGGGAAAAATTATGAATATGGATGATGATGAGGAGGAGGAGGAAGAGGAGGGTGCTGATTGGGGTGAAGGAAAGTGTGAGAAGAATATGAAAGATGATGATAGTCACTCAGATGAAAGTGAGATGATGATGAAGAAGAAGGAGAATAAGAGGAAGAAGATATTGGAATTGAAGTCTCCTGAAAGCTCAGAATCTGAAGAAGACCCTCTCATCAAGACACTGAAGGCACAAGATAGGCATAAGTGCAGCATTTGTGGTAAATCTTTTGCAACTTTCCAAGCCCTAAGGGGACACAGATCCAGCCACAAGAACATTAGGATCATGGATGAGTTAAAGGATAACAACGGAGCTGGTAATATTCCTCAAATGAATAAGACCAAGGGAAGTAAATTTAGAGGACTAGAGGTCGAGGAAGCCGATACTGCACAGGCTCTTGGTGATCATCACAGAATGTATTCTAGAAGATCAGCTGAAAGACCATTGAGTGAAGAAGCATCATCAGCTGGAGCCAGTTTCTCTCATTCTACTGAAGAACTTGGAGAGGCAAGTCCATTAGCTCCCAGAATTTTAGATTTTGATCTGAATGAGCCATATGTCTCAGATGACGAAGCAACTAAGTAA 1602 0.4263 MDFDPENQFEDGFDQIEDKQGSDQEAEKLKGSSGEDENPRAADEGTVQNPASTIRVCDFCGRTFNNGKALGGHRRYHLQVLKKEVAAQSQKVKIRLPKAAIHNNNNSNCVNDVEDNNNLKMEALMSNNGGKGKPTCDLCKKEFPSMKSYYGHMRSHPERNKRAVLLPLPCSPKSANDSVEQKEDNCDIGRTDFAPDDDSPIHLTKSFPSWAKTDQRGRKSIGGAEAAQNLVYLSRGGYFSAPQLTPVVSPQATSFVKAVEAKSSTSGVALQLKTSKVDDDDSPSRKQKLRKIRAYRRGSLKLGDKIDENDDGCGQSVNGGKDLSECGKGKIMNMDDDEEEEEEEGADWGEGKCEKNMKDDDSHSDESEMMMKKKENKRKKILELKSPESSESEEDPLIKTLKAQDRHKCSICGKSFATFQALRGHRSSHKNIRIMDELKDNNGAGNIPQMNKTKGSKFRGLEVEEADTAQALGDHHRMYSRRSAERPLSEEASSAGASFSHSTEELGEASPLAPRILDFDLNEPYVSDDEATK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00661 533 ProSiteProfiles Zinc finger C2H2 type domain profile. 407 434 IPR013087 -
Bach3g00661 533 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 77 IPR013087 -
Bach3g00661 533 MobiDBLite consensus disorder prediction 469 533 - -
Bach3g00661 533 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Bach3g00661 533 ProSiteProfiles Zinc finger C2H2 type domain profile. 134 161 IPR013087 -
Bach3g00661 533 MobiDBLite consensus disorder prediction 12 42 - -
Bach3g00661 533 MobiDBLite consensus disorder prediction 348 396 - -
Bach3g00661 533 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 121 529 IPR044653 GO:0003700
Bach3g00661 533 ProSitePatterns Zinc finger C2H2 type domain signature. 136 156 IPR013087 -
Bach3g00661 533 SUPERFAMILY beta-beta-alpha zinc fingers 135 429 IPR036236 -
Bach3g00661 533 ProSitePatterns Zinc finger C2H2 type domain signature. 409 429 IPR013087 -
Bach3g00661 533 Gene3D Classic Zinc Finger 56 156 - -
Bach3g00661 533 SMART c2h2final6 134 156 IPR013087 -
Bach3g00661 533 SMART c2h2final6 55 77 IPR013087 -
Bach3g00661 533 SMART c2h2final6 407 429 IPR013087 -
Bach3g00661 533 MobiDBLite consensus disorder prediction 1 48 - -
Bach3g00661 533 MobiDBLite consensus disorder prediction 469 488 - -
Bach3g00661 533 Pfam C2H2-type zinc finger 136 158 - -
Bach3g00661 533 Pfam C2H2-type zinc finger 406 430 - -
Bach3g00661 533 Pfam C2H2-type zinc finger 56 79 - -
Bach3g00661 533 MobiDBLite consensus disorder prediction 306 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00661 Bach-Chr3 17072138 17073853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00661 56 169 C2H2 Transcription Factor Family AT2G26940 29.825 2.33e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach3g00661 zf-C2H2_6 1.7e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00661 - - qsa:O6P43_020903 265.003