Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00660 ATGGATAGCAAGATGAATGTAAGTGATGGCCAGAAAATGTCTAAGGGTTGCCAACTCTTGTCATCAGATGAAGAGGAAAGTGGTGGAGATATCATAGGAGGAGAAGGTTCTTTGAAGAAAGGTGCCTGGACATCCACAGAGGACGCAATTTTGGTGGAATTTGTCCAAAAGCATGGAGAGGGTAATTGGAGTGCTGTTCAAAAGTTCACAGGGCTTGCCCGTCCTGGGCATAGCTGCCGTATACGCTGGGTAAATCACCTAAGACCAGAATTAAAGAAAGGCGCATTTAGTCCAGAAGAAGAGCGACGAATAATTGAACTCCATGCTAAGATGGGAAACAAATGGGCTCGAATAGCTGCAGAGTTGCCTGGACGTACTGATAATGAGATAAAGAACTATTGGAATACAAGAACTAGAAGAATGCAACGAGCTGGCTTACCATTATACCCAACTGACACACGCCAGCAACCGTTGAATGACAGCCAAGAAAGTCCAAATGTGAATAGCTTGATGTATGGAGCCAACCAGCAATCTGATGTCTCACAGGTAGGCGGTTGGGATGTTCCTGACGTGGAATTCAAAAATTTAAAAGTCACTCGGTATGGAACAGACATTTTTAATAATACCAACAGCACTCGCAGCATGTTTGAACCAAGTGCTGGTTACCTTCCTGGCAGCTATGCCGGTTTATATGACAATTCCTCTTCTGTGCCCACATCTGGGGACGTGAAGTCAGAGCCCCCTTCATTCCAATATTCGGAAACCCTAAGAATTGCCTTGGGCACACTTGCATCTCCTCTTCCTTCACTTGAGTCTGTAGATACATTGATCAAGTCTCTACCAGCTGTTGGCTTGGGCACACTTACATCTCCTCTTCCTTCACTTGAGTCTGTAGATACATTGATCAAGTCTCTACCAGCTGTTGGCTTGGGCACACTTGCATCTCCTCTTCCTTCACTTGAGTCTATAGATACATCAATCCAGTCTCCACCAGCTGAGCAGATCCAATCATATCCTGTTGGCTGGCGCACACCTGCATCCCCTCTTCCTTCACTTGAGTCTGTAGATACATTGATCAAGTCTCCGCCAGCTGTTGGCTTGGACACACTTGCATCTCCTCTTCCTTCACTTGAGTCTATAGATACATCAATCCAGTCTCCACCAGCTGAGCAGATCCAATCATATCCTGTTGGCTGGCGCACACCTGCATCCCCTCTTCCTTCACTTGAGTCTGTAGATACATTGATCAAGTCTCCACCAGCTGTTGGCTTGGACACACTTGCATCTCCTCTTCCTTCACTTGAGTCTATAGATACATCAATCCAGTCTCCACCAGCTGAGCAGATCCAATCATATCCTGTTGGCTGGCGCACACCTGCATCCCCTCTTCCTTCACTTGAGTCTGTAGATACATTGATCAAGTCTCTACCAGCTGAGCAGCCCCAATCATATCCTGTTGGCTGGGGCGCACCTGCATCCCCTATTCCTTCACTTGTGTCTGTAGATACATTGATCCAGTCTCCACCAGCTGAGCAGACCCAATCATATCCTGTTTCTCTAGAGGGAAGTGGTTTGTTCGAATCAATAGTCTACGGATCAAAGACAAAGAGAGGTGGAAATAATAATTTACTCCAGGAGACTGTTGATAATTGCATGCCCAGAAGTTCAACCTTAAATCCTTGTGACACAGAATGGGATGAACAAGGGGACCTAAGTTCTCCCAGCGCATCGGTTCTTACTGTACATACTCCTATAAGCATGGCCTCTGTGGATGAACCCCAATCAGTTGAAGCCACTAAGGATCATGATGTTAAGCCGGAAACAGTCTTTCAGGACCCAGCTAACTGTTCCAGGAAGAAAAAATATCTGAAGCGGATGGACCCTAAAAGGCCAGATGCTTTGTTTGATTTGGGATGGTTTGGGAATCACTACGATGATAGCAAGGATGAATCAGTTCTAAAAGATGATCGCTAG 1974 0.4595 MDSKMNVSDGQKMSKGCQLLSSDEEESGGDIIGGEGSLKKGAWTSTEDAILVEFVQKHGEGNWSAVQKFTGLARPGHSCRIRWVNHLRPELKKGAFSPEEERRIIELHAKMGNKWARIAAELPGRTDNEIKNYWNTRTRRMQRAGLPLYPTDTRQQPLNDSQESPNVNSLMYGANQQSDVSQVGGWDVPDVEFKNLKVTRYGTDIFNNTNSTRSMFEPSAGYLPGSYAGLYDNSSSVPTSGDVKSEPPSFQYSETLRIALGTLASPLPSLESVDTLIKSLPAVGLGTLTSPLPSLESVDTLIKSLPAVGLGTLASPLPSLESIDTSIQSPPAEQIQSYPVGWRTPASPLPSLESVDTLIKSPPAVGLDTLASPLPSLESIDTSIQSPPAEQIQSYPVGWRTPASPLPSLESVDTLIKSPPAVGLDTLASPLPSLESIDTSIQSPPAEQIQSYPVGWRTPASPLPSLESVDTLIKSLPAEQPQSYPVGWGAPASPIPSLVSVDTLIQSPPAEQTQSYPVSLEGSGLFESIVYGSKTKRGGNNNLLQETVDNCMPRSSTLNPCDTEWDEQGDLSSPSASVLTVHTPISMASVDEPQSVEATKDHDVKPETVFQDPANCSRKKKYLKRMDPKRPDALFDLGWFGNHYDDSKDESVLKDDR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00660 657 SUPERFAMILY Homeodomain-like 38 134 IPR009057 -
Bach3g00660 657 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Bach3g00660 657 MobiDBLite consensus disorder prediction 642 657 - -
Bach3g00660 657 Gene3D Ribonuclease Inhibitor 242 478 IPR032675 -
Bach3g00660 657 FunFam Transcription factor GAMYB 95 141 - -
Bach3g00660 657 CDD SANT 95 136 IPR001005 -
Bach3g00660 657 Gene3D - 95 164 - -
Bach3g00660 657 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 87 IPR017930 -
Bach3g00660 657 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Bach3g00660 657 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Bach3g00660 657 MobiDBLite consensus disorder prediction 1 34 - -
Bach3g00660 657 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 21 652 - -
Bach3g00660 657 SMART sant 39 89 IPR001005 -
Bach3g00660 657 SMART sant 92 140 IPR001005 -
Bach3g00660 657 MobiDBLite consensus disorder prediction 1 21 - -
Bach3g00660 657 FunFam MYB-related transcription factor 39 92 - -
Bach3g00660 657 Gene3D - 39 92 - -
Bach3g00660 657 CDD SANT 42 87 IPR001005 -
Bach3g00660 657 MobiDBLite consensus disorder prediction 638 657 - -
Bach3g00660 657 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Bach3g00660 657 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00660 Bach-Chr3 17048540 17052752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00660 34 163 MYB Transcription Factor Family AT2G32460 69.231 2.53e-59 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g00660 Myb_DNA-binding 2.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00660 K09422 - qsa:O6P43_014646 295.819