Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00653 ATGGGAAATTCCTGTCGGAAACCCATTGCCCATGTTTCTTCCTCCAATATTTCTGGTAGTTCAAAGTCTCATAGCAAGAAAAAGAAGGATTTAAATTCTGCAGAACAAGCAGCTGCTTTAAAAAGTTTGGATCACTCTCTTAAAGCATCAAATCTTAAGTCATTCACCTTCAGTGATCTAAAGGATGCCACAAAGAATTTCCGGCAAGAAAATTTAATTGGAGAGGGTGGCTTTGGTCGTGTCTTCAAGGGATGGATTGACGAGAATACTTTTGCCCCCACAAGACCAGGGAGTGGAATTGTCGTGGCCATTAAGAAACTGAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTAGCAGAAGTCAATTATCTAGGCCAGCTGCACCATGAAAATCTGGTGAAACTAATTGGTTATTGCTCAGATTCGACAAACAGGCTTCTAGTTTATGAGCATATGCAGAAAGGAAGTTTAGAGAATCATTTATTCAGAAAAGGTGTTCAACCCTTACCCTGGGCTACACGGATCAATATAGTGACTGGTGTTGCCAGAGGCTTAGCATTCTTGCATAGCTTGGACAAAAATGTTATCTATCGTGATTTAAAGGCTTCCAACGTCCTTCTTGATTCAGATTTCAACGCAAAGCTTTCTGATTTTGGCTTGGCAAGAGATGGTCCTACTGGAGATAACACTCACGTTTCAACCAGAGTTATTGGAACCCAAGGTTATGCTGCACCGGAGTACGTAGCTACAGGTCACTTGACCCCAAGGAGTGATGTATACAGCTTTGGTGTCGTCTTATTAGAGTTACTCTCCGGAAGACGTGCATTAGACGATGAGAAAGCTGGCTCATCGGAAGAAACTCTGGTGGATTGGGCAAGGCCTTTCCTGAATGATAGCAAACGAGTTTTGAGAATCATGGATACTAGGTTGGGCGGTCAATACACCAGGAGAGAGGCACAAGCTGCAGCTTCACTTGCATTGCAGTGCCTGAACAATGATCCTAAATATAGACCAACTATGAAAGAGGTTCTTGCAGCATTGGAAGGGCTCCATTCCTCAAATTCATTGCCAAGTCCAATGCCAAGGACCCCAAAATCTGGAAATGGTAGTCATGCAAGCAGGCATTCTTCTAGTCACTCCCTAAAGACGACTGCAAATGCAAACTAATAATGAGCTACTAGTCTTTTTGTTATGTTTCCTTCATGAAGATGCTAGGGTCCTGCAACTCTTAGAAGTTTTTGCATTCAGAGTCAGAAGCTAGAGAAAGGCACTATACAAGACATGTAGCAGCATGTGCTTTGTTTCTCTATTTTTTCTTACTGGCTGAGTGGACATTGAATAACCAATGTGCGAGAGTGGGCAGTATGTTTATGTTTCTAGGCATAATTATTGTATGGAAAAGCTTCTCTTTAAAATATAGATTTTTTCCCCAGTTTTGTTATTCACTTGGAAGCCCTGAAGCAGCTGGATTGTTTGTAATGAAATGGGGAATCCACGAACAACCGTAAATATTATAAAAGCTGCATTTTA 1533 0.4175 MGNSCRKPIAHVSSSNISGSSKSHSKKKKDLNSAEQAAALKSLDHSLKASNLKSFTFSDLKDATKNFRQENLIGEGGFGRVFKGWIDENTFAPTRPGSGIVVAIKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSDSTNRLLVYEHMQKGSLENHLFRKGVQPLPWATRINIVTGVARGLAFLHSLDKNVIYRDLKASNVLLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLSGRRALDDEKAGSSEETLVDWARPFLNDSKRVLRIMDTRLGGQYTRREAQAAASLALQCLNNDPKYRPTMKEVLAALEGLHSSNSLPSPMPRTPKSGNGSHASRHSSSHSLKTTANAN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00653 389 PANTHER OS01G0588500 PROTEIN-RELATED 28 352 - -
Bach3g00653 389 SMART serkin_6 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00653 389 CDD STKc_IRAK 73 351 - -
Bach3g00653 389 Gene3D Transferase(Phosphotransferase) domain 1 153 359 - -
Bach3g00653 389 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 153 356 - -
Bach3g00653 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Bach3g00653 389 FunFam Serine/threonine-protein kinase BIK1 33 152 - -
Bach3g00653 389 ProSiteProfiles Protein kinase domain profile. 67 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00653 389 MobiDBLite consensus disorder prediction 1 34 - -
Bach3g00653 389 Gene3D Phosphorylase Kinase; domain 1 37 152 - -
Bach3g00653 389 Pfam Protein kinase domain 68 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00653 389 SUPERFAMILY Protein kinase-like (PK-like) 52 377 IPR011009 -
Bach3g00653 389 ProSitePatterns Protein kinases ATP-binding region signature. 73 106 IPR017441 GO:0005524
Bach3g00653 389 MobiDBLite consensus disorder prediction 352 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00653 Bach-Chr3 17003417 17006850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00653 20 348 Glycoside Hydrolase AT3G07070 47.761 4.95e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bach3g00653 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00653 - - gmx:102664409 582.022