Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00646 ATGGCCAAGAAGCGAAAACTTCGTTCTTCTGAGCCAGAATCTACCAAACCGGTAGAACCACAACCTCCACCGCAAGAGGAGCAAATCCCCGAAGAAACAGTGGACGAACAACCCCAACCTGAAGTAACCCAGGAAGAAGAGCGCCAGGGACCTGAGACCATGGCCGTAGATGGTGATACTAAGCAAGACGAAGCGCGGGAAATAGAAGTTGTCGATGAAGAAGAAACCCAAGAGCAGGTCGAAACTGCAGAAGTTTCGAGCCATGCTGTTGCTGATGCTGCTCCATCTGGATCTGAGCACGAAGCAAATGGAGCTGAGGAGGCTGAGGAAGGTAGCGAGAATGAAGATGAGAGGGAGGATCTGTATGAGGAGCCTGTGGAGAAATTTCTAGAGCCTTTCACGAAGGAGCAGCTTCACACTCTTGTCAAACAAGCGGTGGAAAAGTACCCAGATTTCATAGAGAATGTTCGTCAGCTGGCGGATGTGGACCCTGCCCACCGCAAGATTTTCATCCATGGCCTTGGTTGGGACACCACTGCGGAAACTCTTACCAGTGTGTTTGGGAAGTATGGTGAAATTGAGGATTGCAAGGCTGTTACTGATAAGATCTCTGGGAAGTCCAAAGGCTATGCTTTTATATTGTTTAAGCACCGAAGTGGGGCTAGGAAGGCGCTGAACCAGCCCCAGAAGAAGATTGGGAACCGAACTACTTCATGTCAGCTGGCTTCAGCTGGACCTGTCCCGGCACCACCACCTGTGACTGCACCGGTATCCGAATATACTCAGAGGAAGATCTTTGTAAGCAATGTGAATCCAGATGTTGATCCCCTGAGGTTGCTTGAGTTCTTTAAGCAGTTTGGGGATATAGATGATGGTCCATTGGGTCTTGATAAGCAGACGGGGAAGCCTAAGGGGTTTGCACTTTTTGTTTACAAGTCGGTAGAGAGTGCTAAGAAGGCTTTGGAAGAGCCGCACAAGAACTTTGAGGGGCACAAATTGTATTGTCAGAAGGCTATTGATGGTCCTAAAGGAAACAAGCCATATCATCAGCACCAGCACCAACACCAGCATCAGCATCAACACCATTCTCATCATCACCAGTCACATTACCACTCGAGAAAAGAAAAGAATAAATATCCTACTGGTGCGCCAACGGCTGGATCCGGACACTTGATGGCACCATCAGGCCCTGCTGTAGGTTTCAATCCAGGAGTGCCACCCCAGGGGTTGAACCCCGCACTTGGGCAGGCCCTGACTGCTTTGCTTACAACCCAAGGAGCTGGGTTAGGACTCGATCATCTGTTCGGAGGCGTTGGTGGTGCGCACATGAACCAGGCTGGGCCGCCTGCTGCATATGGTAACCAGGCTGCTGTGAGTTATGGGAATCAGCCAGGGATGCAACCGGGATACCAGAATCCACAAATGGGGCAGAGCAGTGCTGTTAGGCCTCATCCTGGTGCTGGTGGTCCCTACATGGGTCATTAG 1485 0.5071 MAKKRKLRSSEPESTKPVEPQPPPQEEQIPEETVDEQPQPEVTQEEERQGPETMAVDGDTKQDEAREIEVVDEEETQEQVETAEVSSHAVADAAPSGSEHEANGAEEAEEGSENEDEREDLYEEPVEKFLEPFTKEQLHTLVKQAVEKYPDFIENVRQLADVDPAHRKIFIHGLGWDTTAETLTSVFGKYGEIEDCKAVTDKISGKSKGYAFILFKHRSGARKALNQPQKKIGNRTTSCQLASAGPVPAPPPVTAPVSEYTQRKIFVSNVNPDVDPLRLLEFFKQFGDIDDGPLGLDKQTGKPKGFALFVYKSVESAKKALEEPHKNFEGHKLYCQKAIDGPKGNKPYHQHQHQHQHQHQHHSHHHQSHYHSRKEKNKYPTGAPTAGSGHLMAPSGPAVGFNPGVPPQGLNPALGQALTALLTTQGAGLGLDHLFGGVGGAHMNQAGPPAAYGNQAAVSYGNQPGMQPGYQNPQMGQSSAVRPHPGAGGPYMGH 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00646 494 Gene3D - 254 379 IPR012677 -
Bach3g00646 494 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 263 346 IPR000504 GO:0003723
Bach3g00646 494 MobiDBLite consensus disorder prediction 41 67 - -
Bach3g00646 494 MobiDBLite consensus disorder prediction 465 494 - -
Bach3g00646 494 SUPERFAMILY RNA-binding domain, RBD 247 355 IPR035979 GO:0003676
Bach3g00646 494 MobiDBLite consensus disorder prediction 339 404 - -
Bach3g00646 494 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 169 236 IPR000504 GO:0003723
Bach3g00646 494 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 265 333 IPR000504 GO:0003723
Bach3g00646 494 SMART rrm1_1 168 240 IPR000504 GO:0003723
Bach3g00646 494 SMART rrm1_1 264 336 IPR000504 GO:0003723
Bach3g00646 494 MobiDBLite consensus disorder prediction 1 122 - -
Bach3g00646 494 MobiDBLite consensus disorder prediction 465 479 - -
Bach3g00646 494 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 167 244 IPR000504 GO:0003723
Bach3g00646 494 MobiDBLite consensus disorder prediction 348 373 - -
Bach3g00646 494 Gene3D - 159 245 IPR012677 -
Bach3g00646 494 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 40 352 - -
Bach3g00646 494 MobiDBLite consensus disorder prediction 108 122 - -
Bach3g00646 494 SUPERFAMILY RNA-binding domain, RBD 155 245 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00646 Bach-Chr3 16921345 16922829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00646 259 342 C2H2 Transcription Factor Family AT2G19380 29.762 8.36e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00646 K12741 - qsa:O6P43_014622 600.512