Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00641 ATGCCTCTTAATGGAGGGGAGGATGCTTTGCCACCTCCGCCTCCTGTTGTCCCAGAACATGTTGTTCCAGTGAAGGCTGAATCAGAGCTCCCTCCTGGACCTGTTAAGAAAAAGGCTTCCCGGCTTCCAATGGCTAGACGTGGCTTGGCATCAAGAGGAAATAAACTATCTCTTCTTACTAATCACTTTAAAGTCAATGTTTCTAAGACTGATGGGCATTTCTTCCATTATAGTGTGTCTCTTTCTTTTGAAGATGGACGACCTGTAGAGGGTAAAGGAGTAGGGAGAAAAGTAATTGACAGGGTGCAGGAGACTTATGATACTGAGCTAAATGGAAAGGAATTTGCCTATGATGGTGAAAAGAGTTTGTTTACTATTGGTCCTCTTCCTCGAAACAAGCTTGAATTTACAGTTCTTCTTGAGGAAATGACTTCAAACAGAAATAACGGTAATTGCAGCCCTGATGGGAATGGAAGTCCTTATGAGGGAGACAGAAAGAGGATGCGGCGACCATATCGGTCCAAATCGTATAAAGTTGAGATTACCTTTGCTGCAAAAATTCCGATGCAGGCCATTGCCAGTGCCCTGCGTGGTCAAGAATCTGAGAATTTCCAAGAAGCTATACGAGTGCTTGATATTATACTAAGACAACATGCTGCTAAGCAAGGGTGCTTACTGGTTCGGCAGTCCTATTTCCACAATGATCCAAAGAATTTTGTTGATGTAGGAGGTGGGGTGCTTGGTTGTAGAGGATTTCATTCAAGTTTTAGAACTACACAGGGTGGCTTCTCCCTTAATATTGATGTGTCAACTACCATGATTATACAACCTGGGCCTGTGGTAGACTTCTTAATTGCCAACCAAAATGCTAGGGATCCTTTTTCTCTCGACTGGACAAAGGCCAAACGGATGCTTAAAAATCTGAGGATTACGACAAACCCATCCAATCAAGAGTACAAGATAACTGGTCTTTCTGACAGACCCTGCCGAGAGCAAACGTTTACTCTGAAGACCAAAGGTGGGGGAGAGGATGATACTGTAGAAGTGACTGTTTATGATTACTTTGTTAAGCATCGAAATATAGATCTCCGTTATTCTGCTGATTTACCTTGTATTAATGTTGGGAAGCCAAAGCGTCCAACTTATTTCCCACTTGAGCTTTGCTCTTTGGTGTCTTTGCAAAGGTATACCAAAGCATTATCTACACTTCAAAGGGCTTCACTAGTGGAAAAATCTAGGCAGAAGCCACAAGAGAGGATGAAGGTTTTAAGTGATGCTCTAAGAGTCAACAACTATGATGCTGAGCCTATGCTTCGAAATTGTGGAATATCAATAAGCTCTGGCTTTACTCAAGTAGATGGTCGGGTTTTGCAAGCTCCAAGGCTGAAGGTTGGCAATGGGGAGGATTTGTTTCCGAGGAATGGAAGGTGGAATTTCAATAATAAGAAATTAGTGCAGCCAACAAAGATAGAACGATGGGCTGTGGTGAATTTCTCAGCACGCTGTAATGTACAACAACTTGTGCGGGATCTGATTAAAGTTGGAGATATGAAAGGAGTTCCCATGGAGCAGCCATTCAATGTATTCGAAGAAAATCCTCAATTTAGGCGTGCTCCTCCTTTGGTTCGTGTGGAGAAGATGTTTGAGGAAATACAGTCTAAGCTTCCTGGGGCACCTCAATTTCTTCTTTGTCTGCTTCCTGAACGGAAGAACTGTGATCTTTATGGACCATGGAAAAAGAAGAATCTTGCTGAGTTTGGAATTGTTACTCAATGCTTAGCTCCTACGAGGATCAATGACCAATATCTTACCAATCTTCTGTTGAAGATCAATGCTAAACTTGGGGGTTTGAATTCAATGTTGTCTGTTGAACATCCCGCATCCATACCTTTGGTGTCCAAAACTCCTACTATCATTCTAGGCATGGATGTATCCCATGGTTCACCTGGGCAGTCTGATATTCCATCAATTGCTGCAGTGGTGAGCTCTAGACAATGGCCTCTGATATCTAAATACAGGGCTTGTGTTCGTACACAATCTCCTAAGGTTGAAATGATCGATTCCTTATTCAAGCCTGTATCTGAGAATGATGATGAAGGCATTATCAGGTGGGAACTTCTGATTGATTTCTATTCAAGTTCTGGGAAGAGGAAACCGGAAAATATTATCATATTCAGGGATGGAGTCAGTGAGTCTCAGTTCAACCAAGTTTTGAATGTTGAACTTGATCAAATTATTGAGGCCTGCAAGTTTCTTGATGACAAGTGGAACCCCAAATTTACAGTAATTGTTGCTCAGAAAAACCATCATACCAAATTTTTCCAGCCTTCATCTCCAGACAATGTTCCCCCTGGTACTGTTATTGACAATAAAGTTTGCCATCCTCGCAATTATGATTTTTACATGTGCGCACATGCTGGCATGATTGGAACTAGCAGGCCTACCCATTACCATGTTCTATACGATGAGATTGGATTCTCACCTGATGATCTGCAGGAACTTGTGCATTCTCTATCTTATGTGTATCAGAGGAGCACCACTGCCATTTCTGTTGTTGCACCAATATGCTATGCGCACTTGGCAGCTACTCAGTTGGGGCAGTTCATGAAATTTGAGGACAAGTCTGAGACATCTTCTAGCCATGGTGGGTTGACAGCTGCTGGAGCTCCTCCTGTCCCTCCAATGCCGAAATTGAATGACAATGTCAGCAGCTCTATGTTCTTCTGTTGA 2730 0.426 MPLNGGEDALPPPPPVVPEHVVPVKAESELPPGPVKKKASRLPMARRGLASRGNKLSLLTNHFKVNVSKTDGHFFHYSVSLSFEDGRPVEGKGVGRKVIDRVQETYDTELNGKEFAYDGEKSLFTIGPLPRNKLEFTVLLEEMTSNRNNGNCSPDGNGSPYEGDRKRMRRPYRSKSYKVEITFAAKIPMQAIASALRGQESENFQEAIRVLDIILRQHAAKQGCLLVRQSYFHNDPKNFVDVGGGVLGCRGFHSSFRTTQGGFSLNIDVSTTMIIQPGPVVDFLIANQNARDPFSLDWTKAKRMLKNLRITTNPSNQEYKITGLSDRPCREQTFTLKTKGGGEDDTVEVTVYDYFVKHRNIDLRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMKVLSDALRVNNYDAEPMLRNCGISISSGFTQVDGRVLQAPRLKVGNGEDLFPRNGRWNFNNKKLVQPTKIERWAVVNFSARCNVQQLVRDLIKVGDMKGVPMEQPFNVFEENPQFRRAPPLVRVEKMFEEIQSKLPGAPQFLLCLLPERKNCDLYGPWKKKNLAEFGIVTQCLAPTRINDQYLTNLLLKINAKLGGLNSMLSVEHPASIPLVSKTPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDSLFKPVSENDDEGIIRWELLIDFYSSSGKRKPENIIIFRDGVSESQFNQVLNVELDQIIEACKFLDDKWNPKFTVIVAQKNHHTKFFQPSSPDNVPPGTVIDNKVCHPRNYDFYMCAHAGMIGTSRPTHYHVLYDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLTAAGAPPVPPMPKLNDNVSSSMFFC 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00641 909 CDD PAZ_argonaute_like 277 391 - -
Bach3g00641 909 Pfam PAZ domain 281 408 IPR003100 GO:0005515
Bach3g00641 909 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 50 872 - -
Bach3g00641 909 Pfam Mid domain of argonaute 472 524 IPR032473 -
Bach3g00641 909 Gene3D paz domain 271 396 - -
Bach3g00641 909 SMART DUF1785_2 225 277 IPR014811 -
Bach3g00641 909 Pfam N-terminal domain of argonaute 56 215 IPR032474 -
Bach3g00641 909 Gene3D - 456 622 - -
Bach3g00641 909 SMART PAZ_2_a_3 278 417 IPR003100 GO:0005515
Bach3g00641 909 Pfam Argonaute linker 1 domain 227 275 IPR014811 -
Bach3g00641 909 ProSiteProfiles Piwi domain profile. 561 870 IPR003165 GO:0003676
Bach3g00641 909 FunFam Protein argonaute 3 629 909 - -
Bach3g00641 909 CDD Piwi_ago-like 436 864 IPR045246 -
Bach3g00641 909 SUPERFAMILY PAZ domain 272 433 IPR036085 GO:0005515
Bach3g00641 909 Gene3D - 628 909 IPR036397 GO:0003676
Bach3g00641 909 ProSiteProfiles PAZ domain profile. 313 392 IPR003100 GO:0005515
Bach3g00641 909 SMART Piwi_a_2 561 870 IPR003165 GO:0003676
Bach3g00641 909 MobiDBLite consensus disorder prediction 145 169 - -
Bach3g00641 909 SUPERFAMILY Ribonuclease H-like 545 868 IPR012337 -
Bach3g00641 909 FunFam Protein argonaute 7 272 396 - -
Bach3g00641 909 Pfam Argonaute linker 2 domain 418 463 IPR032472 -
Bach3g00641 909 Pfam Piwi domain 562 870 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00641 Bach-Chr3 16877604 16883358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00641 35 909 Eukaryotic Initiation Factors Gene Family AT5G43810 36.194 3.14e-168 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00641 K11593 - qsu:111991924 1556.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g00641 3 16877604 16883358 Bach3g00641 3 16877604 16883358 ECH