Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00636 ATGATTCAACATAGTAACGGACCTCGTTCCTTGAGAGAGCAGTATTCTTCTTCGTCTATAGCCCTATCGCTGGCGGTGGTTGCATCGACGGTTACAGTATCAGTCCCGGATATAGCAATGGAGAAAGGAAAGCATAAATCTAGGAAGGAAGATTATGATAGGAAAGAGGATGATTCCAAGAGGAGTCACCGTGTTCGTGATAGAAACGGGGAAAGAGATAAGGATAGAGAAGAGAGGCACCGAGAGAGAGAGAGGGAGAAGAGGGACCGGGAGAGCCGGCGGCATGAGAGGGAGAAGAGTAATGATTCTGAAGATAGGCATGGTAGGGAGAAGGAGAAGCGTAGAGATAGGAAAAGGGACAAGGAGGACAGGGAGAAAGAGAAAGAGAAAGAGAAAGAGAGGAGAGACAGAGCGAGGGAGAAAGAACGAGAGAGGGAGAGGGAAAGAGAAAGGAGAGAAGATAGGGAGGGAGATGGAGATAGGGAAAGGGAAAAAGAAAGGGAGAGGAGAGTGCGTGATAGGGAGAAACATAGGGAAGTTGATAGTGATTACAGTGATGATGATTTGAGGGAGAGGGATAGGAAGCGGCATAGGAAAGAGGATGACGATTACAAGAGGAGAAAGCGGGAAAGGAGCACCAGCAAGTCAAACAGGCTCGGTGCTGATGTTGAAGATAGCCCAAGGAAGAAGAGTGGTGGAGATGACTCAGATATTAAAGAGAAAAAACCAACCCATGTAGAGGAGATGGAGGATGAAAACAGGAGGTTGGATGAAGAGATGGAAAAGAGGAGGAGGAGAGTTCAGGAGTGGCAAGAGCTGAGGAGGAAGAGGGAAGAAGCTGAGAGAGAAAAGCGAGGTGAGGAGAGTATTGAGGAACCCAAGTCTGGAAGAGTGTGGACACTTGAGGGGGAATCTGATGATGAAGAAGGTCTCACTACAGGGAAGCCAGATTCAGCCATGGATATAGATAGTAGTGAAAATCCTCCTGATAAAGATGCAGGGGATCTGATGGTGGTTGATGTTGGTAATAGAACAGTTCAATCAGATTTACAGGATGGAACTGCTGGTGCTCCTGATGATGAGGAAATTGATCCATTGGATGCTTTCATGAATACGATACTGCCTGAAGTTGAAAAGCTCAATAATGCTGTGGCTCCTTCAACTGCTAATGTAAATGCTGACTTGAAGACCGAGGATAAAGGTGATGAGCAAAGTAATGGTGAACGGCTGAAGAAAGGATTAAATAAATCAATTGGGAGAATAATTCCTGGTGAAGAATCTGACTCAGATTATGCAGATTTGGAAAATGAGGGGGATCCATTAGAAGATGAAGATGATGATGAGTTCATGAAAAGAGTGAAGAAGACAAAAGCTGATAAACTTTCTATAGTTGATCATTCAAAGATTGATTATGAACCATTTAGGAAAAACTTTTATATAGAGGTGAGAGAAATCTCAAAGATGTCTCCTGGAGAAGTTGCAGAATACAGGAAGCAGTTGGAGTTGAAGATACACGGAAAGGACGTGCCGAAGCCTATAAAAACGTGGCACCAGACTGGACTCACTAGCAGAATTTTGGATACAATAAAGAAGCTTAACTTTGAAAAACCAATGCCTATTCAAGCTCAAGCATTGCCTGTAATAATGAGTGGTCGAGACTGCATAGGCATTGCAAAAACTGGGTCAGGCAAAACACTGGCCTTTGTTCTCCCAATGTTGAGGCACATCAAGGATCAGCCACCTGTTGTTGCTGGAGATGGACCAATTGGGCTTATAATGGCTCCTACAAGGGAGCTTGTTCAACAGATTCACAGTGACATAAAGAAGTTTGCAAAGTTATTGGGTCTCAGGTGTGTGCCTGTCTATGGAGGCTCTGGTGTTGCCCAGCAAATTAGTGAGTTGAAACGCGGTACTGAGATTGTGGTTTGTACTCCTGGTAGAATGATTGATATACTTTGTACCAGTGGTGGAAAAATAACTAACCTGCGCAGAGTTACTTATCTGGTCATGGATGAGGCTGATCGAATGTTTGATTTGGGTTTTGAACCTCAGATCACCCGAATTGTTCAGAACATTCGGCCAGATCGACAAACTGTTCTCTTCTCTGCAACTTTCCCTCGTCAGGTTGAAATTCTGGCTCGTAAAATTTTGAATAAACCAGTTGAAATACAGGTTGGTGGGAGGAGTGTTGTGAACAAGGACATAACACAGCTAGTGGAGGTGAGGCAAGAAAGTGAAAGGTTCTGGAGGCTCTTAGAAATATTAGGCAAATGGCATGAAAAAGGAAAGATTTTGATATTTGTTCACTCACAGGTTAAATGTGATACTTTGTTGAAGGATTTGTTTGCTCATGGTTATCCATGCCTTTCTCTTCATGGGGCTAAGGATCAGTCAGACCGTGAATCCACAATTGCTGATTTCAAAAACAATGTATGCAATTTGTTGATTGCAACCAGTGTTGCTGCCAGAGGATTAGATGTCAAAGAGCTTGAACTTGTTATGAATTTTGATGTTCCGAACCATTATGAAGATTATGTGCATCGTGTAGGACGTACTGGTCGAGCTGGCCGGAAGGGTTGTGCTATCACATTTATTTCTGAGGAAGAGGCAAAATATGCACCCGATCTGGTGAAAGCTTTGGAGTTGTCTGAGCAGGTTGTTCCTGATGACCTGAAAGCTCTTGCTGATGGCTTTATGGCGAAAGTGAATCAAGGACTTGAGCAAGCTCATGGGAGTGGTTTTGGGGGAAGTGGCTATAAGTTTAATGAAGAAGAAGACGAAGTGAGGAGAGCAGAAAAGAAAGCACAAGCCAAGGAGTATGGATATGAAGTGCATTCAGATTCTGAAGATGAAGATGAAGGTATTAGAAAGTCAGCAGCTGACATCTCACATCAGGCTGCTATTGCTCGAGTTCTTGCTAGTGCCTCCATAACAAATTCATTAACAATGCCTACTCCCTTCTCTGCTACACTTCCTATGCCATCTCTTATTAATCTCCCATTACCAGGGCCTGCAACAGCCATTCCTGTAACAACACTTCCCCATGTTCCCAATGAGGCAGCAGCTGCTAGGGCGGCTTTAGCTGCCATAAACCTGCAGCACAACTTAGCAAAGATACAAGCTGATGCAATGCCTGAGCACTATGAAGCAGAGTTGGAGATAAATGATTTCCCCCAGAATGCTCGGTGGAAAGTCACACACAAGGAGACTTTGGGCCCAATTTCTGATTATACTGGAGCTGCTATCACCACTAGGGGACAGTATTTGCCACCAGGCAAGGTCCCAGGACCTGGAGAGCGCAAACTTTACCTGTTCATTGAGGGGGCCAGTGAACAATCTGTTAAGAGAGCTAAAGCCGAGTTAAAACGTGTCTTGGAAGACATCACAAATCAGGCTTTTCAGATTCCTGGTGGATCTCAACCAGGAAAATACTCTGTTTTATAG 3444 0.4416 MIQHSNGPRSLREQYSSSSIALSLAVVASTVTVSVPDIAMEKGKHKSRKEDYDRKEDDSKRSHRVRDRNGERDKDREERHREREREKRDRESRRHEREKSNDSEDRHGREKEKRRDRKRDKEDREKEKEKEKERRDRAREKERERERERERREDREGDGDREREKERERRVRDREKHREVDSDYSDDDLRERDRKRHRKEDDDYKRRKRERSTSKSNRLGADVEDSPRKKSGGDDSDIKEKKPTHVEEMEDENRRLDEEMEKRRRRVQEWQELRRKREEAEREKRGEESIEEPKSGRVWTLEGESDDEEGLTTGKPDSAMDIDSSENPPDKDAGDLMVVDVGNRTVQSDLQDGTAGAPDDEEIDPLDAFMNTILPEVEKLNNAVAPSTANVNADLKTEDKGDEQSNGERLKKGLNKSIGRIIPGEESDSDYADLENEGDPLEDEDDDEFMKRVKKTKADKLSIVDHSKIDYEPFRKNFYIEVREISKMSPGEVAEYRKQLELKIHGKDVPKPIKTWHQTGLTSRILDTIKKLNFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKLLGLRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDLGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKILNKPVEIQVGGRSVVNKDITQLVEVRQESERFWRLLEILGKWHEKGKILIFVHSQVKCDTLLKDLFAHGYPCLSLHGAKDQSDRESTIADFKNNVCNLLIATSVAARGLDVKELELVMNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEEAKYAPDLVKALELSEQVVPDDLKALADGFMAKVNQGLEQAHGSGFGGSGYKFNEEEDEVRRAEKKAQAKEYGYEVHSDSEDEDEGIRKSAADISHQAAIARVLASASITNSLTMPTPFSATLPMPSLINLPLPGPATAIPVTTLPHVPNEAAAARAALAAINLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISDYTGAAITTRGQYLPPGKVPGPGERKLYLFIEGASEQSVKRAKAELKRVLEDITNQAFQIPGGSQPGKYSVL 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00636 1147 Gene3D - 466 724 IPR027417 -
Bach3g00636 1147 FunFam probable ATP-dependent RNA helicase DDX17 476 726 - -
Bach3g00636 1147 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 669 677 IPR000629 -
Bach3g00636 1147 CDD SF2_C_DEAD 735 865 - -
Bach3g00636 1147 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 545 723 IPR014001 -
Bach3g00636 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 497 725 IPR027417 -
Bach3g00636 1147 MobiDBLite consensus disorder prediction 384 447 - -
Bach3g00636 1147 MobiDBLite consensus disorder prediction 31 363 - -
Bach3g00636 1147 MobiDBLite consensus disorder prediction 428 446 - -
Bach3g00636 1147 PANTHER RNA HELICASE 458 932 - -
Bach3g00636 1147 MobiDBLite consensus disorder prediction 395 415 - -
Bach3g00636 1147 Gene3D - 725 898 IPR027417 -
Bach3g00636 1147 SMART ultradead3 533 738 IPR014001 -
Bach3g00636 1147 Coils Coil 1111 1131 - -
Bach3g00636 1147 Pfam DEAD/DEAH box helicase 539 710 IPR011545 GO:0003676|GO:0005524
Bach3g00636 1147 CDD DEADc_DDX46 503 724 - -
Bach3g00636 1147 SMART helicmild6 775 856 IPR001650 -
Bach3g00636 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 661 895 IPR027417 -
Bach3g00636 1147 Coils Coil 246 290 - -
Bach3g00636 1147 CDD KH-I_AtRH42_like 1044 1146 - -
Bach3g00636 1147 Coils Coil 111 158 - -
Bach3g00636 1147 MobiDBLite consensus disorder prediction 39 314 - -
Bach3g00636 1147 Coils Coil 74 101 - -
Bach3g00636 1147 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 514 542 IPR014014 GO:0003724
Bach3g00636 1147 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 734 895 IPR001650 -
Bach3g00636 1147 Pfam Helicase conserved C-terminal domain 750 856 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00636 Bach-Chr3 16764873 16770604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00636 501 876 Eukaryotic Initiation Factors Gene Family AT3G19760 31.830 2.41e-56 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00636 K12811 - gmx:100784306 1460.66