Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00573 ATGAACAAGTGCGCGGCATTTCTCGGTAGAACGATTTCAACCAAGTTCTACAACTCACCTTCCCAATGGCGATTCTATTGTTCTCCGCCCTCGGTTTCCTCTTCTCCCTCCAGCAATAAACTGTTTGTCGGAGGGTTGTCATGGTCTGTCGACGAGAAGTCTCTAAAAGAAGCTTTCTCTTCGTTTGGAGACGTCAATGAAGTGAGGATAGTGTATGATAAAGACAGTGGTAGGTCTAGAGGCTTTGGATTTGTCATCTTTTCAAATGAAGACAGTGCAAAATCTGCAAAAGATGCAATGGATGGAAAGGCACTATTAGGAAGACCATTGAGGATTAACTTTGCTCTTGAGAAGGCCCGTGGTGGACCTGTTGTAGTTCCTCGGATATCAAATATTGGAGAATTCAACAGGCACAAAACCTAA 423 0.4374 MNKCAAFLGRTISTKFYNSPSQWRFYCSPPSVSSSPSSNKLFVGGLSWSVDEKSLKEAFSSFGDVNEVRIVYDKDSGRSRGFGFVIFSNEDSAKSAKDAMDGKALLGRPLRINFALEKARGGPVVVPRISNIGEFNRHKT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00573 140 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Bach3g00573 140 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 111 IPR000504 GO:0003723
Bach3g00573 140 CDD RRM2_NsCP33_like 40 115 - -
Bach3g00573 140 SUPERFAMILY RNA-binding domain, RBD 29 123 IPR035979 GO:0003676
Bach3g00573 140 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 31 120 - -
Bach3g00573 140 SMART rrm1_1 40 113 IPR000504 GO:0003723
Bach3g00573 140 Gene3D - 7 121 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00573 Bach-Chr3 15651573 15653486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00573 37 118 C2H2 Transcription Factor Family AT2G19380 36.585 2.70e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00573 - - qsa:O6P43_014563 209.534