Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00560 ATGAACACAATCTTGTGTGCTGCCACCATTGTTCTTTTTCTCTTCAATTTCCATATCCCACTCCCACAAGCTCAGCAAGAATACACAAACAACAACCAAAATGCTTGTGATAATCCCACCAATGCCACACTTGGCAATGTTTGTAACAGTGTCAATTCCTGCCTCTCCTACCTCACTTTCCGATCAATTTTCTCTTACAGCACCCCCGCCACCATAGCCTCCCTCTTCAACTCCACCGCCGCAGCCATATCCACCGCCAATAACTTCACCGGCGGTGCCAACGAAGTCATCTCAGAGAACACCAATTTAATCGTTCCCGTTAATTGCTCCTGCTCCGGATCCGGCCTTTACTATCAATATAACTCTTCTTATGTTTTGAAGACAAATGAAACGTATTTTTCAGTAGCCAATTCCACTTTCGAGGGACTCACCACTTGCCAAGCTCTCATAGCTCAGAACACTTATGGTGAGAGAAGTCTCATAGCTGGGTACAACCTGCGCGTGCCTCTCAGGTGCGCTTGTCCCACTTCGAGCCAGACCCAAGCTGGGTTCAAGTATTTGATTACCTATATGATTTCTCAGGGTGAATCTGTTCCATCAATTGCTCAGCAATTTGGGGTCGATATTCAGAGTGTTTTGGATGCAAACATGCTTTCTGGAAACAGCATCATCTACTACTTCACCCCACTCATGGTTCCCCTGAGACAAGAGCCTAACAGATCCCAACTTGTCATTGCTACGCCGCCGCCGCCGCCTCCACCATCACCGGTCCCTAGTGGGGGTGGGGATTCAAACTCTTCTACGAAATGGGTCATTGTTGGAATCGCTGTTGGAGTTGGTTTGGTTATCATTATTGGAATTTCCCTCTTCTTTTATTGCAGCCGCCGCCGCCGCCGCCAATCTCAGTCACCGGTGGCAAAGGATGTCTCCGTTTCCAAAATTGATACGACCAACAAGAATCTCTTCGATTCTACCACGAACGAATCGTGGTCCGCTTCATTGGATGATCTTCGCGATGCCGTTGATTCTTTAACAGTATACAAATTCGAGGAATTGCAGAAAGCTACAAACTTTTTCAGCAAAGAGAACAGAATCAAGGGATCTGTTTACAAAGCATCGTTCAAGGGAGACGACGCTGCTATTAAGGAGCTCAAAGGGGATGTTTCTGGAGAAATAAACATCCTCAAACGAATCAACCATACCAACATCATAAGGCTCTCTGGTTTTTGTGTTCGCAAAGGAAACACTTACCTCGTTTACGAATTTGCCGAAAATGGTTCACTGGACGACTGCCTTCATTCTAACAAGGATGAGAAGTCTATGACTCTGAATTGGAAGCAGAGGGTTCAGATTGCATATGATGTAGCTGATGCTTTGAATTACCTGCACAATTACACCAACCCAGTTCATATCCACAAGAACTTGAATAGTGGGAATGTGCTTTTGGACGCCAATTTCAGAGCCAAAGTTTCAAACTTTGGGCTAGCAAGAGCAGTGGATGATGAAGAAGAAGGGGGATTTCAACTGACAAGGCATGTGATTGGGACTCGGGGCTATATGGCACCTGAGTATGCTGAACATGGGATTATTACTCCAAAAATGGATGCTTTTGCTTTTGGGGTTGTGACTATGGAGCTTCTTTCAGGAAGAGAAGCCATTACTGGGCAGGAGATGCTCGTTGCTTCCATCAGTGAGGTGCTTGAAGTTGAAGGTGACGATGAGAGAGATAAACTTCGGGTTTTCATGGATCCGAAGTTGGGATCCGAATACCCATTGGAATTGGCATATTCTCTGGCTCAGCTTGCGAAACGGTGCGTTTCAAGTGACCACAATTCTCGTCCAACGATATCTGAGGTCTTCACGACTCTGTCCAAGATTCATTCTACTTCGTTAGATTGA 1899 0.4571 MNTILCAATIVLFLFNFHIPLPQAQQEYTNNNQNACDNPTNATLGNVCNSVNSCLSYLTFRSIFSYSTPATIASLFNSTAAAISTANNFTGGANEVISENTNLIVPVNCSCSGSGLYYQYNSSYVLKTNETYFSVANSTFEGLTTCQALIAQNTYGERSLIAGYNLRVPLRCACPTSSQTQAGFKYLITYMISQGESVPSIAQQFGVDIQSVLDANMLSGNSIIYYFTPLMVPLRQEPNRSQLVIATPPPPPPPSPVPSGGGDSNSSTKWVIVGIAVGVGLVIIIGISLFFYCSRRRRRQSQSPVAKDVSVSKIDTTNKNLFDSTTNESWSASLDDLRDAVDSLTVYKFEELQKATNFFSKENRIKGSVYKASFKGDDAAIKELKGDVSGEINILKRINHTNIIRLSGFCVRKGNTYLVYEFAENGSLDDCLHSNKDEKSMTLNWKQRVQIAYDVADALNYLHNYTNPVHIHKNLNSGNVLLDANFRAKVSNFGLARAVDDEEEGGFQLTRHVIGTRGYMAPEYAEHGIITPKMDAFAFGVVTMELLSGREAITGQEMLVASISEVLEVEGDDERDKLRVFMDPKLGSEYPLELAYSLAQLAKRCVSSDHNSRPTISEVFTTLSKIHSTSLD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00560 632 MobiDBLite consensus disorder prediction 244 259 - -
Bach3g00560 632 Gene3D LysM domain 174 243 IPR036779 -
Bach3g00560 632 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 630 - -
Bach3g00560 632 MobiDBLite consensus disorder prediction 242 263 - -
Bach3g00560 632 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Bach3g00560 632 SMART LysM_2 123 169 IPR018392 -
Bach3g00560 632 SMART LysM_2 189 233 IPR018392 -
Bach3g00560 632 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Bach3g00560 632 SUPERFAMILY Protein kinase-like (PK-like) 341 624 IPR011009 -
Bach3g00560 632 Gene3D Transferase(Phosphotransferase) domain 1 423 631 - -
Bach3g00560 632 Pfam Protein kinase domain 382 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00560 632 Pfam LysM domain 190 224 IPR018392 -
Bach3g00560 632 ProSiteProfiles Protein kinase domain profile. 338 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00560 632 FunFam PTI1-like tyrosine-protein kinase 3 423 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00560 Bach-Chr3 15522798 15524696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00560 5 632 Receptor kinase-like Gene Family AT2G33580 49.251 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bach3g00560 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00560 - - tpra:123921078 693.73