Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00525 ATGCCAGAAAACCGGCAGGTTCAGAAGAATGCTGGTTCTAATCAATCCGGGGACAACATTGAAGAATCCATTTCGCGATTGAAAATCAATGACAATCGGGACAGAGATGCTGCTGCTCAATCAACCCCATTCCCCGATCGACCTGGTGAACCTGATTGTTTATATTACTTGAGGACCGGGTCGTGTGGTTATGGGAGTAACTGCCGTTATAATCACCCTGCACATGTTTCATTTGGCGTTTTATACGGTGAAGATCTCCCTGAGAGGATTGGACAACCAGATTGCGGGTATTTTCTTAAGACGGGAACATGCAAGTATGGATCAACATGTAAATATCATCATCCAAGGGACAGGCGAGGTGCTAGTCCTGTATCCTTTAATGTTCTTGGTCTTCCCATGCGTCAGGAAGAAAAATCATGTCCATATTACATGCGAACTGGGGCTTGTAAGTTTGGAGTTGCTTGCAAGTTTAATCATCCACAGCCTGCCTCTGTGGAAGTTGCCCCTGTGACTGGATCTCCTGCCTCAGCAATTATTCCTTCATCTGGTTTACCTTATGTAGGTGGGCTTCCTGCATGGTCATTACCAAGAATGCCATATTTATCTGGACAGGGACTTCAATCTTATGTGCCTACTTTTCTGCCTACTTCACAAGGCTACACACAGGGCTGGAATAGCTACATGGGAAATATGAACCCTGCAGTGTCTGCCAATTTTCTTGGGTCTAATCTTCTCTACAATTCAATGAATCTGGGAGAGCCGATTTCTAGTGGACAGGTTAATTTATTTTCAACAATGCCAACGCTCCCTGAGAGACCTGACCAACCAGAATGCCGATACTTTATGAGCACTGGGACCTGCAAATTTGGATCTGATTGCAAATTCCACCACCCAAAAGAAAGAGTTGCCCAATCAGTGATTAATCCACTTGGCCTTCCCATAAGACCTGGGCAAGCTATATGTTCTTCCTACAAAGTGTATGGCATATGCAGGTATGGTCCAACGTGCAAATTTGATCATCCATTTGTGACAATCCCTCAGAACTATAGCTTGCATTTACCTCCTATGCCTCTGCTTGGTGAATCTATCATAAGTAATCCAAGAAGCTTGTCAAGGCCATCTGAGACATCTCAATCCAAATCATCAAAATTACCTGGCTGGGTTCCCAAAGCTGATTCCTCAAATGACAAGATTCAAAGCACTGACACAAAAGCTACAGAAGATTCATCAAAACAAGCTGATGCCACGTCGAATAACGTTCCAGCCTCATCCGAGTCTGTACTGGATTAA 1290 0.4419 MPENRQVQKNAGSNQSGDNIEESISRLKINDNRDRDAAAQSTPFPDRPGEPDCLYYLRTGSCGYGSNCRYNHPAHVSFGVLYGEDLPERIGQPDCGYFLKTGTCKYGSTCKYHHPRDRRGASPVSFNVLGLPMRQEEKSCPYYMRTGACKFGVACKFNHPQPASVEVAPVTGSPASAIIPSSGLPYVGGLPAWSLPRMPYLSGQGLQSYVPTFLPTSQGYTQGWNSYMGNMNPAVSANFLGSNLLYNSMNLGEPISSGQVNLFSTMPTLPERPDQPECRYFMSTGTCKFGSDCKFHHPKERVAQSVINPLGLPIRPGQAICSSYKVYGICRYGPTCKFDHPFVTIPQNYSLHLPPMPLLGESIISNPRSLSRPSETSQSKSSKLPGWVPKADSSNDKIQSTDTKATEDSSKQADATSNNVPASSESVLD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00525 429 SUPERFAMILY CCCH zinc finger 52 74 IPR036855 GO:0046872
Bach3g00525 429 SUPERFAMILY CCCH zinc finger 94 118 IPR036855 GO:0046872
Bach3g00525 429 ProSiteProfiles Zinc finger C3H1-type profile. 89 117 IPR000571 GO:0046872
Bach3g00525 429 Gene3D - 268 345 - -
Bach3g00525 429 SUPERFAMILY CCCH zinc finger 133 162 IPR036855 GO:0046872
Bach3g00525 429 Gene3D - 23 85 - -
Bach3g00525 429 ProSiteProfiles Zinc finger C3H1-type profile. 272 300 IPR000571 GO:0046872
Bach3g00525 429 ProSiteProfiles Zinc finger C3H1-type profile. 47 75 IPR000571 GO:0046872
Bach3g00525 429 MobiDBLite consensus disorder prediction 1 46 - -
Bach3g00525 429 MobiDBLite consensus disorder prediction 364 429 - -
Bach3g00525 429 ProSiteProfiles Zinc finger C3H1-type profile. 134 162 IPR000571 GO:0046872
Bach3g00525 429 ProSiteProfiles Zinc finger C3H1-type profile. 315 343 IPR000571 GO:0046872
Bach3g00525 429 SUPERFAMILY CCCH zinc finger 275 301 IPR036855 GO:0046872
Bach3g00525 429 SUPERFAMILY CCCH zinc finger 313 341 IPR036855 GO:0046872
Bach3g00525 429 MobiDBLite consensus disorder prediction 364 384 - -
Bach3g00525 429 PANTHER PROTEIN PHOSPHATASE RELATED 20 367 - -
Bach3g00525 429 SMART c3hfinal6 47 74 IPR000571 GO:0046872
Bach3g00525 429 SMART c3hfinal6 89 116 IPR000571 GO:0046872
Bach3g00525 429 SMART c3hfinal6 136 161 IPR000571 GO:0046872
Bach3g00525 429 SMART c3hfinal6 315 342 IPR000571 GO:0046872
Bach3g00525 429 SMART c3hfinal6 272 299 IPR000571 GO:0046872
Bach3g00525 429 MobiDBLite consensus disorder prediction 1 23 - -
Bach3g00525 429 Gene3D - 87 172 - -
Bach3g00525 429 MobiDBLite consensus disorder prediction 410 429 - -
Bach3g00525 429 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 138 161 IPR000571 GO:0046872
Bach3g00525 429 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 317 342 IPR000571 GO:0046872
Bach3g00525 429 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 49 73 IPR000571 GO:0046872
Bach3g00525 429 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 92 116 IPR000571 GO:0046872
Bach3g00525 429 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 274 299 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00525 Bach-Chr3 14914568 14918620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00525 1 415 C3H Transcription Factor Family AT1G04990 44.262 2.47e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach3g00525 zf-CCCH 1.2e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00525 - - gmx:100792928 612.068