LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach3g00515	GGAAATTGCCTAATGAGGAAAAGGGAGAGGGAGAATCCGTGTGGGGTGTGTGGCCACTATCATAAGTATGAAGAAGGGGAAGTCTGTTCGATTTGCGGCCATCGGGTTCCAGTCGCATCGGAGAAAACTTCAATTCAAGTTAGTGCCTTTCCATCAGTGATTTTGCCGGAATTTCTTTACTTGGGCAGCTACGATAACGCATCACGCTCGGAGCTTCTTAAAACTCAGGGAATCTCTCGTATCCTCAATACGGTTCCTTCTTGTCAAAATCTGTACAGAAACTCGTTTACATATCACTGCCTCTCAGATGACAAAGCCTTGCCATTTGATGATGCAATTGAGTTTCTAGAACAATGTGAGAGGGACAAGGCTCGTGTTTTGGTTCATTGCATGTCAGGAAAGAATAGGTCTCCAGCTATTGTGATGGCATATCTGATGAAGTCCAAGGGATGGAGATTGGCACAGAGTTACCACTGGGTAAAAGAGCGGAGACCTTCCGTTGAACTAACCGAAGGTGTCTATCAGCAACTGCAAGAGTACGAGCACAAGATCTTTGGATCGATTGAAGGTGGCAGCCCTCTGCTGCCTACATTCCCGCCTGCCGTGCCTCCTTCAGTTAGCTTTGGCTTCCCAAAGATTAATGACTCAGCTTCTGCTCTTCCTGCCTTCAGCAATGCCGGAGCTACGTCGATTTTTGCACGATCAACCCCAGACAACCTTCCGACAGAGTTTACATTTGGAGCTGGTCAGGCTCAGGACGTTACCGGAAACCCATTGAATGCCAATCCGAGTAATCCAAACGGCAGTGATATTCAAATGGATGGTTCTTGA	831	0.4717	MRKRERENPCGVCGHYHKYEEGEVCSICGHRVPVASEKTSIQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYRNSFTYHCLSDDKALPFDDAIEFLEQCERDKARVLVHCMSGKNRSPAIVMAYLMKSKGWRLAQSYHWVKERRPSVELTEGVYQQLQEYEHKIFGSIEGGSPLLPTFPPAVPPSVSFGFPKINDSASALPAFSNAGATSIFARSTPDNLPTEFTFGAGQAQDVTGNPLNANPSNPNGSDIQMDGS	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach3g00515	272	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	47	181	IPR029021	-
	Bach3g00515	272	Gene3D	Protein tyrosine phosphatase superfamily	40	185	IPR029021	-
	Bach3g00515	272	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	103	171	IPR000387	GO:0016311\|GO:0016791
	Bach3g00515	272	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	46	182	IPR020422	GO:0006470\|GO:0008138
	Bach3g00515	272	FunFam	Protein-tyrosine-phosphatase IBR5	36	186	-	-
	Bach3g00515	272	Pfam	Dual specificity phosphatase, catalytic domain	55	178	IPR000340	GO:0008138\|GO:0016311
	Bach3g00515	272	MobiDBLite	consensus disorder prediction	244	272	-	-
	Bach3g00515	272	CDD	DSP_plant_IBR5-like	47	176	-	-
	Bach3g00515	272	SMART	dsp_5	46	179	IPR020422	GO:0006470\|GO:0008138
	Bach3g00515	272	PANTHER	PROTEIN-TYROSINE-PHOSPHATASE IBR5	1	272	IPR044212	GO:0009734\|GO:0009738\|GO:0033549\|GO:0043407
	Bach3g00515	272	ProSitePatterns	Tyrosine specific protein phosphatases active site.	124	134	IPR016130	GO:0016311\|GO:0016791

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach3g00515	Bach-Chr3	14783105	14789094	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach3g00515	1	166	Protein tyrosine phosphatase (PTP) family	AT2G04550	76.331	9.26e-99	285

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach3g00515	K04459		-	gmx:100806021	455.677