Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00484 ATGGTTTCTTCAGAAGAAAGTGCAGATCACGATGTTTCTTCTGATAAATTGCAGCTAATAGTGCGTTCTCATAGTGGAATTACAGTGTCACAAGAGATTCCTGATGATACAAATAATTCATCCAAAACAGGGGAAACTAAAAACGTTCCTCTTGTTACAGCTGAGAAAGAAGCACAATATTCTGATGTTACCACTTCTGTAGTGCAATCTGGTCAAGAAGGAAGTACGTGCTCTTTGGCACTTGAGAAACCTTTGCAGAGCCCTAATACTGTTCTGCGTGCATTGCAATCTGGTCAGGAAAGTCCCTCTATAATTCGTGAAAAGGTCTCAAAGGATGGATACAACTGGCGAAAATATGGCCAGAAACTTGTTAAGGGAAATGAATTTATAAGAAGCTACTACAAGTGTACACATCCAAACTGCCTTGCAAAGAAGCAATTAGAACAGTCACATGGTGGGCAAGTTACAGATACCATTTACATTGGTCAGCATAATCATTCTAGACCTCAACTAAATTCCCCACCGCCAGTTGATTTTGTTGCGCCTGCTGTTAAAGAAAGACCAGACAAACTCTCTTTAGCCAATGTGGATGATAAAGCATCCACTGAGCATGGATGTGTGCCTCAACAGACGAAGCCTTTAGATTCCCTTCCAATTTCAAGAGTTTCCTCATGTAATAAGGTCGAAGGTGTGTTGTTACAATCAGCTTGTGTAAAGGGTGAGGTTCATGATAATGGGGATCCTGAGTCTAAACGGCTTAAGAAAGACAATCGTAGTGCTGGTGTTACTGGAGTTGAGAAATCAACTAGTGAATCTCGTGTTGTTGTGCAAACCTCCAGTGAGGTTGATTTTGTAAATGATGGGTACCGCTGGCGCAAGTATGGGCAGAAACTAGTAAGAGGGAATCCAAATCCAAGGAGTTACTACCGATGCTCAAATCCTGGATGTCCAGTGAAGAAGCATGTGGAAAGGGCCTCTCATGATCCAAAAGTCGTAATAACTACCTACGAGGGAAAGCATGATCATGAAATGCCCCCTGGAAGGACTTTTACTCAAAATACTGCAGAAGATACTCGCAAAGCAGCCAATAACGGCGAGTCAGGAACCAAATCCGTAGGCACAAGCGGGTTAAACAATCAACTAAATGGTAAGATGGGTACTAAATCAAAGGATGAGGTTACCAACCATCCCAATGAGGATCATGGAAATAAGTCAAGTGATCAAGAACAAATAGATGGCAATTCTAGTACCCAAAAAGATCCTGTCAGCTCTGAGGTTGTCAGCCATTCAAGTTCTGGAGTTCCCTGTAGATCACATGAACAGCTGAAAGGTAAAGTAAGAGCTAAATCAGAAGAAAGTAAGGAAGATTCCCCTTGTGTGGTTTCTGTTCATGATACTCCTAGTACAGAAAATAAATTAAATAAGCGATCTAGTCCTGATGCAGAACCAGTCAGAAGCTAGATTGGCAATGCTCTTCTAATTAGCAGTAAATTACTAGAGACCATTAAATAGTTGAAAATAACATATAGGTTATACAGGAATAATTGTTAATGAGGTTGTGATTCCTATTACTACCCTAATTTTCTCAAAACTCTTCCTCCCTTTAGTTCTCTCATCTTTGGGGAAGGTTCACTAGATATGCAAACAATGGACATTTAATGTCATCAATTGTATACTATTATTCACATGGGATATATTGTTGATGTATATTTTCCCATACAAGTATCTAAGTTTTCAACTTTTTTGTAATATATTGTTGACA 1762 0.3967 MVSSEESADHDVSSDKLQLIVRSHSGITVSQEIPDDTNNSSKTGETKNVPLVTAEKEAQYSDVTTSVVQSGQEGSTCSLALEKPLQSPNTVLRALQSGQESPSIIREKVSKDGYNWRKYGQKLVKGNEFIRSYYKCTHPNCLAKKQLEQSHGGQVTDTIYIGQHNHSRPQLNSPPPVDFVAPAVKERPDKLSLANVDDKASTEHGCVPQQTKPLDSLPISRVSSCNKVEGVLLQSACVKGEVHDNGDPESKRLKKDNRSAGVTGVEKSTSESRVVVQTSSEVDFVNDGYRWRKYGQKLVRGNPNPRSYYRCSNPGCPVKKHVERASHDPKVVITTYEGKHDHEMPPGRTFTQNTAEDTRKAANNGESGTKSVGTSGLNNQLNGKMGTKSKDEVTNHPNEDHGNKSSDQEQIDGNSSTQKDPVSSEVVSHSSSGVPCRSHEQLKGKVRAKSEESKEDSPCVVSVHDTPSTENKLNKRSSPDAEPVRS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00484 486 SUPERFAMILY WRKY DNA-binding domain 277 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 MobiDBLite consensus disorder prediction 408 437 - -
Bach3g00484 486 MobiDBLite consensus disorder prediction 242 261 - -
Bach3g00484 486 SUPERFAMILY WRKY DNA-binding domain 106 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 Gene3D WRKY domain 101 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 MobiDBLite consensus disorder prediction 358 388 - -
Bach3g00484 486 MobiDBLite consensus disorder prediction 24 56 - -
Bach3g00484 486 FunFam WRKY transcription factor 57 271 345 - -
Bach3g00484 486 FunFam WRKY transcription factor 99 170 - -
Bach3g00484 486 MobiDBLite consensus disorder prediction 358 486 - -
Bach3g00484 486 MobiDBLite consensus disorder prediction 469 486 - -
Bach3g00484 486 MobiDBLite consensus disorder prediction 440 459 - -
Bach3g00484 486 ProSiteProfiles WRKY domain profile. 280 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 363 IPR044810 GO:0003700
Bach3g00484 486 Gene3D WRKY domain 272 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 MobiDBLite consensus disorder prediction 24 48 - -
Bach3g00484 486 Pfam WRKY DNA -binding domain 111 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 Pfam WRKY DNA -binding domain 286 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 MobiDBLite consensus disorder prediction 241 268 - -
Bach3g00484 486 ProSiteProfiles WRKY domain profile. 105 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 SMART WRKY_cls 110 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 SMART WRKY_cls 285 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach3g00484 486 MobiDBLite consensus disorder prediction 389 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00484 Bach-Chr3 13913069 13916879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00484 94 367 WRKY Transcription Factor Family AT2G04880 52.143 7.11e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach3g00484 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00484 K18834 - gmx:100782726 574.704