Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00482 ATGCTTCTTTCGGCTGTGCAGAGAGCAGGGATACCCAGTTATAGGAAAAGAACAAATTTTCCAATCTCATTCATCATTTTCTCAGTGGTTGCCAAAATGACAACTGGGTTTGATTCAGCTTCTAGTGAGGTCCAATTATGGGGATGTTTTACTGAAGCTGGGGCTTATCATGAGCCTTCAAGTTTCAATAATGAGTCTTTGGTGAGGAAAGAGAAGGTTTGGGATGCTTGTGAGGAAAGAGCTCGAATCTTGTTGCAACGTTATAATGTAAGCAGAAAAAGATTTCGTGCTTTGGCTTCTCTATTCTCTGGATCAGATCAGTGTATTGATGAAAGAGGACTACAAAAGCTGTTAACCAATGATATAGACAGTTCACAATGTCCAGAGAATCAGTTATCAGAGGACCATCCATGTGTTGCTGGCAGTGTTGAATCCATAGAACAATGCCCAATCCTTGATGAATATGCACATAAAAAGCTTGAATTGTCATTGCTAGTGGACAAGTCTGCATCAGTGGCCTCACAGTCTGAACATTCATCCCATTTGGTTGATCATTTCTTCTGTGAGAAGAACATATTGCTGTCATGTCTACTGGAGGTCTTTGCAATGCTGGGTTCTGGCAGTCTGTCTAGTTTGGTTAAAGGAAGTTGTTGGGTCCTTCTTGGACTTGCAATGTGCTACAAACTGTCTGGTTTCCATGTATTATGGAGGAGTAAAAATCAGGTGATCCAGCGGCAGCCAGTTGCTCAGCAGAAGCAGCTACAGCAACATTCTGTCCACGGTCCTCCAAAGTGTGCCGGAAGGTGGAGGAAAAGGTTTTTAATTTTGTTCGTCTCACTAGGAATACTTGGGTCCATTTGGTTATTCTGGCACTTAAATAAGGACATCAAGTTAAGAAGAAAAGAAATGCTTGCCAATATGTGTGATGAGCGGGCCCGTATGCTGCAGGACCAGTTTAACGTGAGCATGAACCATGTTCATGCTCTGGCTGTTCTTGTATCTACCTTTCACCATGGTAAACATCCTTCTACAATTGATCAGAAAACATTTGGAGAGTATACAGAGAGTACAGCTTTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTCTAAAAGTTCCTCACTCTGTTAGGGAGCAATTTGAGAAGGAGCATAGTTGGACAATTAAGAAAATGGAAACTGAAAATGAAACACTAGTCCAAGATTGTATTCCAGAAAATTTGGATCCTGCACCCATTCAAGATGAATATGCACCAGTCATATTTGCTCAAGAAACTGTTTCCCATATTGTATCTATTGACATGATGTCAGGAAAGGAAGACCATGAGAATATCTTGCGAGCAAGGGCATCTGGAAAGGGAGTGCTGACATCTCCTTTTAAACTGCTAAAGTCCAATCATGTTGGTGTTGTTCTTACATTTGCTGTCTATAACACTGATCTTCCTCCGGATGCTACACCAGAGCAGCGAAATGAAGCTACTGTTGGGTATTTGGGTGCATCCTATGATGTTCCATCGCTGGTGGACAAGCTTCTGCACCAACTTGCCAGCAAGCAAACAATTGTTGTAAATGTTTATGATACAACTAATGCATCTGCACCCATCACCATGTATGGTACTGATGTTGCTGATACTGGCCTTCTGCATATAAGCAATCTAGATTTTGGGGATCCACTACGAAAACATGAGATGCATTGCAGGTTCAAGCAGAGACCTCCATTACCTTGGACATCAATCAATGCATCAGCGGGAGTATTTGTTATCACTCTGCTTCTTGGCCATATTTTTTATGCTGCAATAAATAGAATAGCAAAAGTGGAGGAGGATTACCGGAAAATGATGGAGCTTAAAGTTCGTGCTGAAGCTGCAGATGTGGCAAAGTCTCAGTTTCTTGCAACGGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGGCACTGAGCTTGACGAAAACCAGATGGATTATGCTGAGACTGCTCATGGAAGTGGTAAAGATCTTATATCAGTGATAAATGAAGTTCTTGATCAGGCTAAGATCGAGGCTGGCAAACTTGAACTTGAAGATGTAGCTTTTGATCCACGTGCTATTTTAGATGAAGTTCTATCACTCTTCTCAGGAAAATCTAATGCGAAAAGAATTGAGTTGGCTGCTTACGTATCCAATCAGGTGCCTGAAGTTGTCATTGGTGATCCTAAACGATTCCGGCAAACAATTACTAATCTTGTGGGGAATTCTCTTAAGTTCACTCATGACAAAGGACATGTACTTGTCTCGATTCATCTGGTGGATGAAGTAAGGAGCCCAGTTGATATTATGGATCTAGTGCTGAGACAAGGTTTAAACCGGGATCAGGACATGCCAGACAGAAGTTATAACACATTGAGTGGGTTTCCAGTAGTCAACAGATGGAAAAGCTGGGAAAATTTCAAAAGGCTAAGCAGCATAAATCTGGTAGATGAGCCTGGAATTATTCAATTATTAGCAACAGTTGAGGATACAGGTATAGGAATTCCTGTGGATGCACAAAGCCGGATATTCACGCCTTTTATGCAGGCTGATAGTTCTACCTCACGAACCTATGGCGGGACCGGAATAGGACTGAGCATTAGTAAATGTCTAGTTGATCTCATGGGAGGAGAAATTGGATTTGTAAGTGAACCTGGTATTGGCAGTACTTTTACATTCACCGGAATTTTCAGGAAAGGAGAAACGACTTCTTTGGATGCCAAGTGGCAGCAGAACTCTCCTCTTACTTCAGAGTTCCAAGGATTAAGAGCATTAGTGGTAGATAGAAGAAACATCCGAGCTGAGGTCACAAGATATTATTTGCAGAGGTTGGGGATGTCTGTGGATGTGACTTTTAGTCTGGAATCATCATACTCTTATTTATCTAGTAACAACAGTATGTCTACACAGTTGGCCATTATGCTTTTAGAAAAGGATGTTTGGGATAAGGAACGTAGCATATTATGTTCAATCAAGAAACACAGACAGAATGGCTTCAAAGATGATCCAATGAATTTTCCCAAGATTTTTCTCTTGGCCTCTCACCTTAGTCCCAGTGAACGTGATGAGCTAGAATCTGCTGGTGCTGTAGATGATATACTTGTAAAACCTCTTTGGCTTAGTGATGTGGTTCGTTACTTCAGAGAAGCCCTCGGTAGTGAAAAAAGGCAAATATATAGAAAGAAAGCATCAAATCTGGGGAACTTGTTAATGCAGAAACGAATTTTGGTGGTTGATGACAATGCAGTGAACAGAAAAGTTGCAGATGGGGTTTTGCAGAAATATGGGGCAATAGTTACCTGTGTGAATGGGGGCAAGGTTGCTCTAAAGATGCTTAATCCACCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAAGTTACACGGCGAGTCCGTTGTCTGGAGAACGAGGTAAATGAGAAAATTGCATCTGGCAAAGCATCGGCTGAGATGTTTGGTAATGTGGCTTATTGGCACACACCGATATTAGCCATGACAGCTGATGTAATTCAGCCTACAAATGAGGAGTGCAGTAAGTGTGGAATGGATGGTTATGTGGCAAAGCCATTTGAAGAAGACCAGCTCTATACAACAATGGCACGCTTCTTCGAACCTGATTCATAG 3681 0.4162 MLLSAVQRAGIPSYRKRTNFPISFIIFSVVAKMTTGFDSASSEVQLWGCFTEAGAYHEPSSFNNESLVRKEKVWDACEERARILLQRYNVSRKRFRALASLFSGSDQCIDERGLQKLLTNDIDSSQCPENQLSEDHPCVAGSVESIEQCPILDEYAHKKLELSLLVDKSASVASQSEHSSHLVDHFFCEKNILLSCLLEVFAMLGSGSLSSLVKGSCWVLLGLAMCYKLSGFHVLWRSKNQVIQRQPVAQQKQLQQHSVHGPPKCAGRWRKRFLILFVSLGILGSIWLFWHLNKDIKLRRKEMLANMCDERARMLQDQFNVSMNHVHALAVLVSTFHHGKHPSTIDQKTFGEYTESTAFERPLTSGVAYALKVPHSVREQFEKEHSWTIKKMETENETLVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDHENILRARASGKGVLTSPFKLLKSNHVGVVLTFAVYNTDLPPDATPEQRNEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNASAPITMYGTDVADTGLLHISNLDFGDPLRKHEMHCRFKQRPPLPWTSINASAGVFVITLLLGHIFYAAINRIAKVEEDYRKMMELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMGTELDENQMDYAETAHGSGKDLISVINEVLDQAKIEAGKLELEDVAFDPRAILDEVLSLFSGKSNAKRIELAAYVSNQVPEVVIGDPKRFRQTITNLVGNSLKFTHDKGHVLVSIHLVDEVRSPVDIMDLVLRQGLNRDQDMPDRSYNTLSGFPVVNRWKSWENFKRLSSINLVDEPGIIQLLATVEDTGIGIPVDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPGIGSTFTFTGIFRKGETTSLDAKWQQNSPLTSEFQGLRALVVDRRNIRAEVTRYYLQRLGMSVDVTFSLESSYSYLSSNNSMSTQLAIMLLEKDVWDKERSILCSIKKHRQNGFKDDPMNFPKIFLLASHLSPSERDELESAGAVDDILVKPLWLSDVVRYFREALGSEKRQIYRKKASNLGNLLMQKRILVVDDNAVNRKVADGVLQKYGAIVTCVNGGKVALKMLNPPHNFDACFMDLQMPEMDGFEVTRRVRCLENEVNEKIASGKASAEMFGNVAYWHTPILAMTADVIQPTNEECSKCGMDGYVAKPFEEDQLYTTMARFFEPDS 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00482 1226 Pfam His Kinase A (phospho-acceptor) domain 626 691 IPR003661 GO:0000155|GO:0007165
Bach3g00482 1226 PANTHER TWO-COMPONENT HISTIDINE KINASE 272 1215 - -
Bach3g00482 1226 Gene3D - 690 909 IPR036890 -
Bach3g00482 1226 ProSiteProfiles Response regulatory domain profile. 934 1062 IPR001789 GO:0000160
Bach3g00482 1226 SMART CHASE_2 341 540 IPR006189 -
Bach3g00482 1226 FunFam Histidine kinase 4 598 689 - -
Bach3g00482 1226 SUPERFAMILY CheY-like 929 1063 IPR011006 -
Bach3g00482 1226 Gene3D CHASE domain 345 572 IPR042240 -
Bach3g00482 1226 Gene3D - 292 344 - -
Bach3g00482 1226 Gene3D - 63 105 - -
Bach3g00482 1226 CDD REC_hyHK_CKI1_RcsC-like 1086 1218 - -
Bach3g00482 1226 SMART HisKA_10 626 691 IPR003661 GO:0000155|GO:0007165
Bach3g00482 1226 Gene3D - 1080 1225 - -
Bach3g00482 1226 ProSiteProfiles Histidine kinase domain profile. 633 910 IPR005467 -
Bach3g00482 1226 CDD HATPase_EvgS-ArcB-TorS-like 743 905 - -
Bach3g00482 1226 Pfam Response regulator receiver domain 1086 1217 IPR001789 GO:0000160
Bach3g00482 1226 Coils Coil 603 623 - -
Bach3g00482 1226 SMART HKATPase_4 738 910 IPR003594 -
Bach3g00482 1226 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 613 692 IPR036097 GO:0000155|GO:0007165
Bach3g00482 1226 CDD HisKA 626 687 IPR003661 GO:0000155|GO:0007165
Bach3g00482 1226 Gene3D - 924 1079 - -
Bach3g00482 1226 ProSiteProfiles CHASE domain profile. 341 565 IPR006189 -
Bach3g00482 1226 Gene3D - 597 689 - -
Bach3g00482 1226 SMART REC_2 1084 1218 IPR001789 GO:0000160
Bach3g00482 1226 SUPERFAMILY CheY-like 1084 1222 IPR011006 -
Bach3g00482 1226 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 680 905 IPR036890 -
Bach3g00482 1226 PRINTS Bacterial sensor protein C-terminal signature 835 849 IPR004358 GO:0016310|GO:0016772
Bach3g00482 1226 PRINTS Bacterial sensor protein C-terminal signature 853 863 IPR004358 GO:0016310|GO:0016772
Bach3g00482 1226 PRINTS Bacterial sensor protein C-terminal signature 894 907 IPR004358 GO:0016310|GO:0016772
Bach3g00482 1226 PRINTS Bacterial sensor protein C-terminal signature 870 888 IPR004358 GO:0016310|GO:0016772
Bach3g00482 1226 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 738 905 IPR003594 -
Bach3g00482 1226 Pfam CHASE domain 344 538 IPR006189 -
Bach3g00482 1226 ProSiteProfiles Response regulatory domain profile. 1085 1222 IPR001789 GO:0000160
Bach3g00482 1226 FunFam Histidine kinase 4 345 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00482 Bach-Chr3 13887092 13895124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00482 209 1224 Miscellaneous Gene Families AT5G35750 65.392 0.0 1346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach3g00482 CHASE 8.4e-35 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00482 K14489 - gmx:100805107 1707.96