Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00480 ATGGGTACATCATCTGGCTCAAATATCAACCACCAGCATTCATCACAAATACTCCCTCCACATCAGCAGTCACGGGTTGGAGGACTACAAACATCACTGTCTCTAGTTTCTTCAGATCCTCGCCTCTCTCCTGAGGAACCTAGATCAAACTCTGACAATAATCGGGATTCTCCCATGGAAAGTGCTAGTTCTCGAGAAACATGGCCTACTGCTGATGCTATTGCAGCAAAGAAGATGGAAAATGGGAAAGCTGAGAATGATGGTATGGAGCAATCAGTCATTCGCCGTGTTTCTAGTGCAGACAAAATCACTCTTCAGGACATAGCTAGAGAAAGAGTTGATATGATCTCTGAAAAGATGGAGCATCTACCTGAAGAATTTTTAGAAGAGCTGAAGAGTGGACTTCGAGTTATCCTTGAGGGAGGCAATGGTTCACAGCATAGAGAGGAGTTTTTCATTTTGCAGAAGCTTGTTCAAAGTAGAACTGATTTAACAGCCAAAACTTTGATTAGAGCGCATCGTGTGCAGCTTGAAATTCTTGTTGCAATAAACACTGGAATTCAGGGATTTTTGCATCCAAGTATCAGTCTGTCACAAAATTCCCTGATTGAGATCTTTGTGTACAAGAGATGCAGAAACATAGCATGCCAAAGCCAGCTTCCTGCTGATGATTGTACGTGTGAGATATGCACCAAAAGGAATGGTTTCTGCAATCTTTGCATGTGTGTAATCTGCAGCAAGTTTGACTTTGAAGTTAATACATGTCGCTGGATTGGATGTGATCTGTGTTCTCATTGGACCCATACAGATTGTGCATATCGTGATCAACTTATTTGCATGGGCCCTTCCGTGAAGAGTGCAGCAGGAGCAAGTGAGATGGTTTTCAGGTGTCAAGCATGCAATAGGACTTCAGAACTGTTGGGTTGGGTTAAAGATGTTTTCCAGCATTGTGCACCATCCTGGGATGGGGAGGCTTTGATGAGGGAGCTTGAATTTGTTAGTAGGATCTTTCATGGTAGTCAAGACCCCCGAGGGAAGAAATTATTTTGGAAGTGTGAGGATCTCAAGGAAAAGATGAGAAGTGGAGTGGTGGAATCAAAGGCAGCTTGCAGAGCAATATTATTATTTTTCCAAGAGCTTGAAGTGGACTCACCAAAGAGTCTGGAAAATGGAGAAAGTGGAAGGCTGATTGCTCCACAGGAAGCATGCGGTAGAATTGCTGAAGTGGTAAAGGAGGCCATAAGAAAGATGGAAATGGTAGCCGATGAGAAGCTGAGAATGTTTAAGAAGGCCCGCTTGGCTCTTGACAATTGTGATCGTGAATTGGCAGACAAGGCAAGGGAAGCAGCAGAACTTAAGATGGAGAGGCAAAAAAGGAAATTGCAGGTTGAAGAACTGGAGAGAATTGTGAGGCTTAAAACTGCAGAGGCTGAAATGTTCCAATCAAAGGCTAATGAGGCAAAACGAGAGGCTGAGAGGCTCCAGAGGATTGCTCTTGCCAAGCAAGATAAATCAGAGGAAGAATATACAAGCAACTACCTAAAACAACGGTTAAGCGAGGCTGAGGCTGAGAAGCAATATCTCTATGAGAAGATCAAATTGCAGGAGAGTACCCGCACATCTCAGAGCAGCAGTGGTGGTGACCCTTCTCAGAGGCTGATCTTTTCCAAAATCCATGATCTGCTTCAACCAAATGAACGCCACCCTTTCCGTACTAATCCATGAGTACTAGTTTGGAGTATGTTATAATCTTTTACAATATGTTTACCAATGTCATTCTGTTTTGAACAAGTATAAAGAGTCAGTCTGATCCCATTTTATTTTATGACAATTTTATCAGCCTTTGTACAGGGAAGAGATATCAGTAAAGCAGTTTGAAACTAGGCTTATTCTATAGATATGCTACTGTAACAAATTGTTGGTGTTGTGCTACTGAATCTGTGGGTGCTTATCCGTTGTATGTTATAGTTTTGATATTATGAATAGCTAAAAGTGCATTTTAG 2003 0.4219 MGTSSGSNINHQHSSQILPPHQQSRVGGLQTSLSLVSSDPRLSPEEPRSNSDNNRDSPMESASSRETWPTADAIAAKKMENGKAENDGMEQSVIRRVSSADKITLQDIARERVDMISEKMEHLPEEFLEELKSGLRVILEGGNGSQHREEFFILQKLVQSRTDLTAKTLIRAHRVQLEILVAINTGIQGFLHPSISLSQNSLIEIFVYKRCRNIACQSQLPADDCTCEICTKRNGFCNLCMCVICSKFDFEVNTCRWIGCDLCSHWTHTDCAYRDQLICMGPSVKSAAGASEMVFRCQACNRTSELLGWVKDVFQHCAPSWDGEALMRELEFVSRIFHGSQDPRGKKLFWKCEDLKEKMRSGVVESKAACRAILLFFQELEVDSPKSLENGESGRLIAPQEACGRIAEVVKEAIRKMEMVADEKLRMFKKARLALDNCDRELADKAREAAELKMERQKRKLQVEELERIVRLKTAEAEMFQSKANEAKREAERLQRIALAKQDKSEEEYTSNYLKQRLSEAEAEKQYLYEKIKLQESTRTSQSSSGGDPSQRLIFSKIHDLLQPNERHPFRTNP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00480 574 Pfam Coiled-coil region of Oberon 429 562 IPR032535 -
Bach3g00480 574 MobiDBLite consensus disorder prediction 1 39 - -
Bach3g00480 574 Coils Coil 477 504 - -
Bach3g00480 574 MobiDBLite consensus disorder prediction 54 68 - -
Bach3g00480 574 MobiDBLite consensus disorder prediction 535 551 - -
Bach3g00480 574 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 26 563 IPR004082 -
Bach3g00480 574 MobiDBLite consensus disorder prediction 1 68 - -
Bach3g00480 574 MobiDBLite consensus disorder prediction 535 574 - -
Bach3g00480 574 Pfam PHD - plant homeodomain finger protein 211 334 IPR032881 -
Bach3g00480 574 Coils Coil 435 469 - -
Bach3g00480 574 PIRSF UCP025218 1 569 - -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 248 268 IPR004082 -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 464 484 IPR004082 -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 119 141 IPR004082 -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 176 191 IPR004082 -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 202 223 IPR004082 -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 503 525 IPR004082 -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 161 176 IPR004082 -
Bach3g00480 574 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 321 340 IPR004082 -
Bach3g00480 574 CDD PHD_OBE1_like 241 300 IPR047578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00480 Bach-Chr3 13870769 13873122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00480 211 313 PHD Gene Family AT5G57380 30.769 2.69e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00480 - - qsa:O6P43_020737 988.023