Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00440 ATGGGCCAACTTGCCAAGCTGCCCTGCGATAGCGATGGTGTTTGCATGGCTTGCATGCAGAAGCCGGTGTCCGACGACACCATAGCTTGTACGACATGTACCACACCGTGGCACATTGCGTGCCTTCTTGACGGCGATGGAGCTCTCAAAACTCAGGCCGATTGTCTGCATTGGGAGTGCCCGGATTGCTCTCCGGTCGAGGATTCTGGTCCGGCCCAGGTTGCCGGCCGGGGAGAGTCTACCGAGCTGATCGCTGCTATAAAGGCGATCGAGTCGGACACTTCCCTCACTGATCAAGAGAAGGCGAGGAAGCGTCAGCAGCTTCTTGGTGGGTCGGCGTTGGCAAATTTATCTAACGATGGTGAAGGGAGTTCAAATCCGACAAGGAACAATGAGGTTCTAGATATCTTGGATGGCAGATTGAACTGTTCCTTCTGCATGCAGCTTCCAGACAGGCCTGTAACGACTCCATGTGGCCACAACTTTTGCTTGAAGTGCTTCCAGAAATGGGTTGGACAAGGACATAAAAGTTGTGCCAAATGTCGCTGTAAAATCCCATCTGATATGGCTAGCGAACCCAAAATCAATTCTCAGCTTGCAATGGCCATAAGAGTGGCTAAAAGGTCAAAAGCAAATGGTGGTGTGGCTGCTGGGCCACCAAGGCCTTATCATTATTTAAGCAATGATGACCGTCCGGACGAAGCATTCACCACGGAGCGAGCTAAGAAGGCTGGAAAGGCTAACGCTTCTAGTGGCAGGATCTTTGTCACAATTCATCATGAACATTTTGGACCTATTCTTGCAGAGCATGATCCCACAAGGAATCGCGGTGTTCTGGTGGGAGACACTTGGTATCATAGGTTGGATTGTAGACAATGGGGTGTCCATCGTCCCCATGTTGCGGGCATAGCTGGGCAGAGCGGTTATGGTGCACAGTCAGTGGCCATTTCTGGAGGCTATATAGATGATGAGGACCACGGAGACTGGTTCCTTTACACTGGCAGTGGGGGAAAAGACCTTAGTGGCAACAGACGCACGAATAACAAGCATTCATTTGACCAGGAGTTTGAGAGTTCTAATGAGGCGCTGAGAGTAAGTTGCCGAAAAGGTTATCCTGTTCGGGTAATAAGGTCCTCCAAGGAGAAAAGCCCTTATGCACCAGATAATGGGCTTCGTTATGATGGAATATACAGGATAGAAAGATGCTGGCGTATAGCTGGAAAACAAGGCCGCAAGGTTTGTAGGTATTTGTTTGTCCGCTGTGATAATGAACCTGCACCATGGGCAAGTGATGATAATGGAGATCGACCACGCCCCCTGCCTCTAATTGAGGAGTTGGAGCGTGCAATTGATTTTACTGAAAGAAGGGGAGCTCCGTCATGGGATTATGATGATGAAAAGGGCTGCTGGTTGTGGAAGAAGTCTCCACCTCCACCTCCGCCACCAAAGAGCACAAAACACAATGAAGATGGGACAGAAGGAAAAACAGGCAAGCGGAAAGGGAAAAGGCTGTCCCCGAATGAACAACTTTTGAAAAAGTTTAGGTGCTCCCTTTGTTGTAAAGTTTTGACTCTGCCTGTCACTACACCTTGTGCTCACAACTTCTGCAAAGCTTGTCTGGAGGAGAAGTTTGCTGGCCAAAGTTATATCAGAAACAGGACATGTCATGGGGGACGCTCTTTAAGAGCACAAAAGAACGTTATGAAATGCCCAACATGTTCAATTGACATAACCGAATTTGTTCAGAACCCACAGGTTAACAGAGAACTTATGGGTATCATTGAATCTCTTCATCATGAAGCTGAAGAAACAGATCAAAATGCTGAAGAATCAAGTGACAAAACTGAAGAAAACCATGAGAATCTGGAAGATGTCACTGAAGAAAAAACCCTTTGTGATTCCAGCGTCAGTGTTCTTGAGGAACTCAACGACAATGATCTGCACCAGAGGACATCGAAGCGAATGAAGGTTGATGAAGGAATTTGCATATTGAATACCCAGCGGTGTATACTTGAATTGGATGACGATGAAGAGACTGGCAATTGA 2046 0.4765 MGQLAKLPCDSDGVCMACMQKPVSDDTIACTTCTTPWHIACLLDGDGALKTQADCLHWECPDCSPVEDSGPAQVAGRGESTELIAAIKAIESDTSLTDQEKARKRQQLLGGSALANLSNDGEGSSNPTRNNEVLDILDGRLNCSFCMQLPDRPVTTPCGHNFCLKCFQKWVGQGHKSCAKCRCKIPSDMASEPKINSQLAMAIRVAKRSKANGGVAAGPPRPYHYLSNDDRPDEAFTTERAKKAGKANASSGRIFVTIHHEHFGPILAEHDPTRNRGVLVGDTWYHRLDCRQWGVHRPHVAGIAGQSGYGAQSVAISGGYIDDEDHGDWFLYTGSGGKDLSGNRRTNNKHSFDQEFESSNEALRVSCRKGYPVRVIRSSKEKSPYAPDNGLRYDGIYRIERCWRIAGKQGRKVCRYLFVRCDNEPAPWASDDNGDRPRPLPLIEELERAIDFTERRGAPSWDYDDEKGCWLWKKSPPPPPPPKSTKHNEDGTEGKTGKRKGKRLSPNEQLLKKFRCSLCCKVLTLPVTTPCAHNFCKACLEEKFAGQSYIRNRTCHGGRSLRAQKNVMKCPTCSIDITEFVQNPQVNRELMGIIESLHHEAEETDQNAEESSDKTEENHENLEDVTEEKTLCDSSVSVLEELNDNDLHQRTSKRMKVDEGICILNTQRCILELDDDEETGN 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00440 681 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 504 627 IPR013083 -
Bach3g00440 681 SMART G9a_1 268 424 IPR003105 -
Bach3g00440 681 MobiDBLite consensus disorder prediction 486 504 - -
Bach3g00440 681 MobiDBLite consensus disorder prediction 474 504 - -
Bach3g00440 681 ProSitePatterns Zinc finger PHD-type signature. 15 63 IPR019786 -
Bach3g00440 681 Gene3D - 244 442 IPR036987 -
Bach3g00440 681 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 3 614 IPR045134 -
Bach3g00440 681 SUPERFAMILY FYVE/PHD zinc finger 8 65 IPR011011 -
Bach3g00440 681 SUPERFAMILY PUA domain-like 248 440 IPR015947 -
Bach3g00440 681 Pfam Zinc finger, C3HC4 type (RING finger) 143 181 IPR018957 GO:0046872
Bach3g00440 681 Coils Coil 594 625 - -
Bach3g00440 681 ProSiteProfiles Zinc finger RING-type profile. 516 574 IPR001841 -
Bach3g00440 681 FunFam Predicted protein 99 208 - -
Bach3g00440 681 MobiDBLite consensus disorder prediction 611 627 - -
Bach3g00440 681 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 209 IPR013083 -
Bach3g00440 681 MobiDBLite consensus disorder prediction 600 627 - -
Bach3g00440 681 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 244 438 - -
Bach3g00440 681 ProSitePatterns Zinc finger RING-type signature. 531 540 IPR017907 -
Bach3g00440 681 ProSiteProfiles Zinc finger RING-type profile. 143 182 IPR001841 -
Bach3g00440 681 SUPERFAMILY RING/U-box 509 598 - -
Bach3g00440 681 CDD RING-HC_ORTHRUS_rpt1 141 186 IPR047498 -
Bach3g00440 681 Pfam RING-type zinc-finger 516 555 IPR027370 -
Bach3g00440 681 SUPERFAMILY RING/U-box 135 189 - -
Bach3g00440 681 ProSiteProfiles YDG domain profile. 273 420 IPR003105 -
Bach3g00440 681 MobiDBLite consensus disorder prediction 211 232 - -
Bach3g00440 681 Pfam SAD/SRA domain 276 423 IPR003105 -
Bach3g00440 681 SMART ring_2 15 63 IPR001841 -
Bach3g00440 681 SMART ring_2 143 181 IPR001841 -
Bach3g00440 681 SMART ring_2 516 573 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00440 Bach-Chr3 12972220 12976141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00440 1 605 C2H2 Transcription Factor Family AT5G39550 56.046 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00440 K10638 - gmx:100786796 852.432