Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00417 ATGGCCGACTCAGATAACGAATCGGGTGGGCATACGAACAATGCCCACAGCGAGTTATCGACAAAGGAGCAGGACCGGTTCTTGCCGATCGCAAACGTGAGCAGGATAATGAAGAAAGCGTTGCCGGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACAGTGCAGGAATGCGTATCGGAGTTCATAAGCTTCATCACCGGCGAGGCCTCCGATAAGTGCCAGAGGGAGAAGAGGAAGACTATCAACGGCGACGATTTGCTCTGGGCCATGACGACCTTAGGATTCGAAGAGTACGTCGAGCCCTTGAAGATTTATCTCCAGAAGTACAGGGAGATGGAGGGGGAGAAGACCTCTATGGGGAAGCCGGGTGAGAAGGACGGTGGTTTCGCTGGTGGATCTTCCGCCGGCGGAGTAGTGTCAGCGCAGGGGGTTGCAGGCGGAGTTGGAGGATTCAATGGTGTTGGTGGAATGTATGGTGGGATGTATAATCAAGGAAACGTGTACGGTTCTGGTGGGTTTCAACACATGGGTATTGGTGGTGGTGGTGCTGAAAACTCTCATTCCGGTGGAAGCAGTGGTGGTGGAGCTTCTATGAGATCTAGGTAG 609 0.5369 MADSDNESGGHTNNAHSELSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKTSMGKPGEKDGGFAGGSSAGGVVSAQGVAGGVGGFNGVGGMYGGMYNQGNVYGSGGFQHMGIGGGGAENSHSGGSSGGGASMRSR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00417 202 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach3g00417 202 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 7 129 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bach3g00417 202 MobiDBLite consensus disorder prediction 186 202 - -
Bach3g00417 202 MobiDBLite consensus disorder prediction 1 17 - -
Bach3g00417 202 MobiDBLite consensus disorder prediction 179 202 - -
Bach3g00417 202 Gene3D Histone, subunit A 15 133 IPR009072 GO:0046982
Bach3g00417 202 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
Bach3g00417 202 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Bach3g00417 202 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Bach3g00417 202 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Bach3g00417 202 MobiDBLite consensus disorder prediction 1 25 - -
Bach3g00417 202 FunFam Nuclear transcription factor Y subunit B-3 16 137 - -
Bach3g00417 202 SUPERFAMILY Histone-fold 24 127 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00417 Bach-Chr3 12102284 12102892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00417 1 127 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.375 3.10e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach3g00417 CBFD_NFYB_HMF 1.9e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00417 K08065 - csv:101219076 246.128