Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00409 ATGGCAACAAATTGCTCCTGTTCATGTCTAATTGTGTTGTTTTTGGCGCCATGTTTGGTAAATGGAGTAACAACCAACATTACGACAGACCAATCTGCTCTTCTTGCCCTAAAAGCCCATATCAGCCATGACCCTTCTACCATTTTGACCCAAAATTGGACCACCAATACCTCAGTGTGCAGTTGGTTTGGTGTCATATGTGGTTCTCGTCACAAAAGAGTCACAATCTTGGATCTATCGGGTATGAACCTAACTGGTACCATCCCTCCACATCTAGGGAACATGTCCTTCCTAGTTCAACTGCGTCTCGATTACAATAGGTTACACGGTTCTCTGCCTGCTGAACTGAGCAGGTTAAGAAGAATCAAGTTACTGGTTTTCCGCAGTAACAACTTGACAGGAGAAATCCCATCATGGGTTGGCTTGTTACCAAAGCTTGAACAATTGTTTCTGGATGATAATGTATTTTCCGGTCCTTTACCTGGGACTATTTTCAATGCATCTTCTCCTTTGCAAGTCATATCTCTTTCTAAAATTTTTTTGGGTTCTATACCCTTCTCTGCTATATCCAATATGTCTTCACTTAGAGTCATTGATCTCAGTGAAAACATGCTATCTCCAAGCAAGATTCCAGCAGACATGTTCAATCGGCTTTCCAAGTTAGAACTTCTTGATTTGGGAAGAAACAGGTTCTATGGAGAAATCCCATCAACTCTTTTCAGCCTCAAGCAAATGCAGCAGTTAAATCTGAATTTCAATAATCTTAGTGGAAATGTACCCATAGATATAAAAAATCTGACCTTACTTACTGATCTCCATCTCCCCAATAACTCATTCACAGGAACCATTCCTAGAGAAATTGGAAACTTAACCCTGCTTAAGGAGATTGAACTAGGATTCAATCATTTCTATGGTGGAGAACGGTCTATAACACGAACCATGACCCTTGCTACCATTGGATATATGGCACCAGAATACGGATCAGAAGGAGTCATTTCTACAAGAGGTGATGTATACAGTTTTGGTATCCTTGTATTGGAAACTTTCACTAGTAAGAAACCTACTGATGATATGTTTTCTGGAGGGATAAGCTTGAAGAGTTGGGTGGAGAATTCCTTTATTCATGCATTAAGTGAGGTCGTGGATGCCAAATTGTTAAGTAATGGAATTGATCACTTTGACTTTAAGAAGCATTATATTTCTTCAATCATTGGAGTGGCATTGGATTGTTGTCGGGAGACACCACAAGAAAGAGAAAATATGAAAGACGTTGTTGCAGCACTAAAAAAAATAAAAACGAAGCTTTTAAAGGCTGATGGTCAAGGTAGCTGA 1332 0.3964 MATNCSCSCLIVLFLAPCLVNGVTTNITTDQSALLALKAHISHDPSTILTQNWTTNTSVCSWFGVICGSRHKRVTILDLSGMNLTGTIPPHLGNMSFLVQLRLDYNRLHGSLPAELSRLRRIKLLVFRSNNLTGEIPSWVGLLPKLEQLFLDDNVFSGPLPGTIFNASSPLQVISLSKIFLGSIPFSAISNMSSLRVIDLSENMLSPSKIPADMFNRLSKLELLDLGRNRFYGEIPSTLFSLKQMQQLNLNFNNLSGNVPIDIKNLTLLTDLHLPNNSFTGTIPREIGNLTLLKEIELGFNHFYGGERSITRTMTLATIGYMAPEYGSEGVISTRGDVYSFGILVLETFTSKKPTDDMFSGGISLKSWVENSFIHALSEVVDAKLLSNGIDHFDFKKHYISSIIGVALDCCRETPQERENMKDVVAALKKIKTKLLKADGQGS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00409 443 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 312 430 - -
Bach3g00409 443 Gene3D Transferase(Phosphotransferase) domain 1 285 440 - -
Bach3g00409 443 SUPERFAMILY L domain-like 29 308 - -
Bach3g00409 443 ProSiteProfiles Protein kinase domain profile. 86 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00409 443 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Bach3g00409 443 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 213 307 - -
Bach3g00409 443 Gene3D Ribonuclease Inhibitor 209 268 IPR032675 -
Bach3g00409 443 SUPERFAMILY Protein kinase-like (PK-like) 308 428 IPR011009 -
Bach3g00409 443 Gene3D Ribonuclease Inhibitor 25 208 IPR032675 -
Bach3g00409 443 SMART LRR_typ_2 266 290 IPR003591 -
Bach3g00409 443 SMART LRR_typ_2 192 217 IPR003591 -
Bach3g00409 443 SMART LRR_typ_2 218 242 IPR003591 -
Bach3g00409 443 SMART LRR_typ_2 95 119 IPR003591 -
Bach3g00409 443 SMART LRR_typ_2 143 167 IPR003591 -
Bach3g00409 443 FunFam Nuclear pore complex protein NUP107 27 186 - -
Bach3g00409 443 Pfam Protein tyrosine and serine/threonine kinase 310 427 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00409 Bach-Chr3 12013648 12018022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00409 306 431 Receptor kinase-like Gene Family AT1G28440 33.071 9.16e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bach3g00409 PK_Tyr_Ser-Thr 1.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00409 - K19613 cill:122278853 370.163