Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00384 TTCTAGGGTTCCTTCGCTTTTCAGTTTTTGCTGAATAAATTATTAGAATTTCTGAAAAGGTTGAGACCCTTGTCGATCTTGTTTCTCTTGCCGTGAGAGTTCGCAGTCTTAAAATTTCCACCTTCTTTATCACGGATTGTAAGACCCTACAAAATTCTGCTTCATCTTCTTAGAATAAGATGACACTTTTTGTTTGGCAAACAGATATTCTAGTTTGGGTAGAGCACTGCTAATTGGAGAATTCTGTTTGGATTAAGGAACAATAGAAGGGTCAGTTTAAAGATGGGTTATATATGTGATTTTTGTGGAGATCAGAGGTCCATGGTGTACTGCCGTTCTGATACTGCAAGCTTATGTTTGTCATGCGATCAAAATGTTCATTCTGCTAATGCCCTCTCTAGGCGTCATTCAAGAACCCTTTTGTGTGAGAGATGCAATTCACAACCTGCAGTAGTAAGGTGTGCTGAAGAGAAAATTTCTCTTTGTCAGAATTGTGATTGGTTGGCTCATGGGGCCTCTACATCACCTTCAACGCATAAGAGGCAAACAATTGGCTGCTACTCTGGCTGCCCTTCTGCAGCCGAATTTTCTTCAATGTGGCCATTTGTCTTAGATATCCCTTCCATTGGTGAATCTACATGTGAACAGGAACTAGGTTTGATGAGCATTAATGAGGACAGTGACAGGAGTACTTGGGTTTCTTCAGAAATCCAGAATGCATCTGGTTCAGTTCAAGTAACTGGTTTATGCAACGTTGATAAAACTTCTGTTGGAACATCTTCAATGCCTGAATCAAGCTCAGAACCCCGTATTATGGACCAGCTAGCTGGACTTGCCAATGAAACTCTGGCCAAGATATACTGTCCTGGTACAAAAGTTTCTGGATTTTGTGATGAAGATAATCTGTATGATGATTTCAACATGGACGAAGTTGATCTGAGTCTTGAGAACTATGAGGAACTTTTTGGTATGACACTCAGCCATTCTGAAGAACTCCTTGAAAATGGTGGAATTGATAGCTTGTTTGGGACGAAGGACATGTCTGCCGGTGATTCCAATTGTCAGGGTGCTGTTGCAGCTGAGGGTTCGTCAGCTGAACTGGTCAATGTAATGCAACCAGCTTGCAGCAATGGAGCGTCTGCTGATTCCACGTTAAGTACTAAGACTGACTCAATTCTTTGTTTCACGGCAAAGCAAGGTCAATCAAACCTTTCATTTTCTGGCGTTACTGGAGAGTGTAACCCTGCAGATTATCAAGATTGTGGAGCTTCTTCAATGCTTCACATGGGAGAACCTCCATGGTGTCCTCCTTGCCCTGAGAATTCCCTACATTCAGCTAACCGCAGTAATGCTGTCATGCGTTATAAAGAAAAGAAGGCTGCTCGCAAGTTTGATAAAAAAGTGAGGTACGCCTCACGCAAGGCCAGGGCTGACACTAGAAGGCGTGTGAAAGGCCGCTTTGTGAAGGCTGGTGAGGCCTATGATTATGACCCTCTGAGCCAAACCAGAAGCTACTGA 1518 0.4289 MGYICDFCGDQRSMVYCRSDTASLCLSCDQNVHSANALSRRHSRTLLCERCNSQPAVVRCAEEKISLCQNCDWLAHGASTSPSTHKRQTIGCYSGCPSAAEFSSMWPFVLDIPSIGESTCEQELGLMSINEDSDRSTWVSSEIQNASGSVQVTGLCNVDKTSVGTSSMPESSSEPRIMDQLAGLANETLAKIYCPGTKVSGFCDEDNLYDDFNMDEVDLSLENYEELFGMTLSHSEELLENGGIDSLFGTKDMSAGDSNCQGAVAAEGSSAELVNVMQPACSNGASADSTLSTKTDSILCFTAKQGQSNLSFSGVTGECNPADYQDCGASSMLHMGEPPWCPPCPENSLHSANRSNAVMRYKEKKAARKFDKKVRYASRKARADTRRRVKGRFVKAGEAYDYDPLSQTRSY 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00384 411 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bach3g00384 411 SMART bboxneu5 48 90 IPR000315 GO:0008270
Bach3g00384 411 CDD Bbox1_BBX-like 47 90 - -
Bach3g00384 411 Pfam CCT motif 354 396 IPR010402 GO:0005515
Bach3g00384 411 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bach3g00384 411 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Bach3g00384 411 CDD Bbox1_BBX-like 4 47 - -
Bach3g00384 411 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Bach3g00384 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00384 Bach-Chr3 11291757 11296529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00384 1 411 C2C2-CO-like Transcription Factor Family AT3G07650 55.607 7.51e-153 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach3g00384 CCT 2.5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00384 - - gmx:100800832 653.669