Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00342 TCCATTGATGTCATCCTTGTTCAGCTCGCAGTTTTGCCCAAATCTTGAAGGGTAGCGTTTCTATTCTCTGATACTTTCTCGAAATTTGATGGAAAATGCAGGTCCTGAGTTTCAAAATGATGGGGATTACGTGTCAGATCCTGCTCATCATCTGGAGATAAGTACTGGAGATGAAAAAGGTGAAGAGGCCTCCTTGATTCAGCAGTCCAGACGGCCAAGCCTCTCTTCTTTGCAAATACCGGCAAGGTCACTGGAAAGTACATTATCTTCTTTTGCCAACATAGATTCTCCTTTGCTGACAAGTTTGGGTTCCTCTAGAGGAGGATTGCCCCCAAGGCCAAATTCTACCAAAGCCAAGCCTTCTATAAGAAGTTTACTTCCTCAGAGGAGCTTCAAGACAAAAGATGATCCCCAAGACTGTGAAAAGACAATCATTATTGTTCCTGATATTCCCCCTTCAGATCATCCTGTGGATAGGCGTGCAACTTCAAGGTCCCTTTCTCTTAATAAGGTTCTTTTCCCTTCATCAAGAAAAGTAACGCTTTCATTACCAGCTACGCCAACCATAAATTCAGGTGTAGAGACTCTGCATGGAAGACACCCATGCAGTATTCGGGATTCAAGTAAAATGGATCTTAAGCAGCTTATGACTAGATCATTTTCAGTTCCAGTTGATGTCAGAACCACTAGTTTAAGGTGTACAAGTTCTAGTAGTTTGATCCGTGTGATTTCAGCAAGATCACATGCTTCAGCAGTTGAAAGTAGTTCAAGTGATGTTGCTCCAGTGCCTGAGATTGTCACAGAAGATACTGCTGAGGATATCCCAGAGGAAGAAGCAGTTTGTAGGATTTGTTTGGTGGAACTTGGGGAAGGAGGGGATACTCTAAAGATGGAATGCTGTTGTAAGGGCGAGCTTGCACTAGCTCACAAAGAGTGTGCAGTGAAGTGGTTTAGTATCAAGGGAAACATGACCTGTGATGTTTGTAAGCAGGATGTCCGGAACCTCCCAGTAACATTGTTGAAAATTCGCAATCCTCCCAGACGCTTTGTAATTAGTATGGAATCTTATTTCATGTATGACAGGATCTGGCAGAATGTACTTGTAGTTATCTTGGTCAGCATGCTAGCTTATTTCTGCTTTTTGGAGCAGCTTCTGGTTTCAGATTTGGGTGTTAATGCTCTTTCCATTTCATTACCTTTCTCCTGCGCTTTAGGTTTCCTTTCAACCATGATTGCTTCAACCATGGTGAGCAGGAGTTACATATGGGCTTATGCTTGCTTCCAGTTTGCAATTATTGTCCTCTTTGCTCATTTGTTTTATACAATACTTAATGTAAGTCCGGTTGTATCAGTTCTTCTTTCCTCATCCACTGGATTTGGGATTGCAATCAGCATGAATACTCTTCTTATGGAATGTATTAGATGGAGAGCTAGTAGGCATATCCCATTTTTCAATCGCGATGTCATTAGGACAGAGCAGCAGCAGCACCATGCTGATGTACAACAGCTATAA 1513 0.4223 MENAGPEFQNDGDYVSDPAHHLEISTGDEKGEEASLIQQSRRPSLSSLQIPARSLESTLSSFANIDSPLLTSLGSSRGGLPPRPNSTKAKPSIRSLLPQRSFKTKDDPQDCEKTIIIVPDIPPSDHPVDRRATSRSLSLNKVLFPSSRKVTLSLPATPTINSGVETLHGRHPCSIRDSSKMDLKQLMTRSFSVPVDVRTTSLRCTSSSSLIRVISARSHASAVESSSSDVAPVPEIVTEDTAEDIPEEEAVCRICLVELGEGGDTLKMECCCKGELALAHKECAVKWFSIKGNMTCDVCKQDVRNLPVTLLKIRNPPRRFVISMESYFMYDRIWQNVLVVILVSMLAYFCFLEQLLVSDLGVNALSISLPFSCALGFLSTMIASTMVSRSYIWAYACFQFAIIVLFAHLFYTILNVSPVVSVLLSSSTGFGIAISMNTLLMECIRWRASRHIPFFNRDVIRTEQQQHHADVQQL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00342 474 MobiDBLite consensus disorder prediction 14 36 - -
Bach3g00342 474 SUPERFAMILY RING/U-box 248 303 - -
Bach3g00342 474 MobiDBLite consensus disorder prediction 1 49 - -
Bach3g00342 474 PANTHER OS02G0165000 PROTEIN 32 452 - -
Bach3g00342 474 ProSiteProfiles Zinc finger RING-CH-type profile. 244 306 IPR011016 GO:0008270
Bach3g00342 474 CDD RING_CH-C4HC3_MARCH 252 300 - -
Bach3g00342 474 Pfam RING-variant domain 252 299 IPR011016 GO:0008270
Bach3g00342 474 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 237 307 IPR013083 -
Bach3g00342 474 SMART ringv_2 251 300 IPR011016 GO:0008270
Bach3g00342 474 MobiDBLite consensus disorder prediction 72 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00342 Bach-Chr3 10129163 10137740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00342 237 352 C3H Transcription Factor Family AT2G37950 32.031 1.43e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00342 - - qsa:O6P43_014398 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01893 12 15869243 15881342 Bach3g00342 3 10129163 10137740 BWGD