Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00276 GGGGAGAATGGGGTGACAATTTCGAGAAACCTTGGGTCGAGGGCTGTTCGACTTCAAAGCAGGGACCTTTAGGCAGCAACGATGCCATTTTTAGATTATACTTCAAAGGGTTGGTGAACCAGGAGAGGATTAAGGGTGAAAAGACCCTTTTAGCGGGGATTGGGATTGCGATTGCGATTTGTGACCCCCATGGACAATTTGATATTCGAGGACAAGAAGCCACTGCTTGGGAATGGATTGAGTAAAACTGCTGCAGAGGCTAAGGCTTTAATTGAAGGCCTTAACGCTGCTATTGCTTTGGACTTGAACCGTATCACGTATTGTTGCACCTACTATCCGCTGTACCAATTTGTAAGTGGAAGATGGCCTCCAAAACAGAGGAAGATTGCCATGCTAGTTAATCAGGTGACTCTGCTTCAAAGAAAATTTACATACTGCAATCCAAAGCTTGTGCCTGGAGAGGATGTTAAATTTACGTTTAACTTTGCAAAAGATGCAATTATGTCTCAGATCACAATGCCCGCAGAATCTAGCTGCACAAAGAATCTGAATGAGACTTGTGTCATATGTTTGGAAGACACTGATGTTAGTCACATTTTTTCAGTTGATGGATGTCAACACCGGTATTGCTTTTCTTGCATGAAACAACATGTGAAGGCGACGTTGCTTCATGGAATGAATCGAATAAAAGAAGCATCAATTCTTGTTTCTGAGAAAATTTATTGCCCTTATCCAAGATGCTCTGCATTAATGTCAAAAACTGAGCTTTTGGATTCTGCTAAAAGGAAGTTTGGCGACCCTGAACAATCAGGACCTAAGAATTGCATAAAATGTCATGGTCTTTTCTGTATCAGCTGCAAGGTCCCTTGGCATAGCGGTCAGACATGCAGGGTTTACAAAATGTTGAATCCTAACCCTCCTGCTGAAGATTTGAAGCCGAAATCTCTTGCAACAAGGAGTTTATGGCAGCAGTGTGTGAAGTGCAACCATATGATTGAACTTGCTGAAGGTTGCTATCACATGACTTGCAGATGCGGTTATGAATTTTGCTATAACTGTGGAGCTGAATGGAAGAACAAGAAAGCAACATGGATTTATTCAAAACTCCCGAACCAATGGCTGCAAACACAACGGATTAGCAATGGAAATGGTTTAAGGACTGGTTATTTGCAACATTTGGAGGTTATGATGGCTGAAAAATTACCGGGATATGGGTTAAAAGGTAATCCACACATCCAATCTCGGTTGAAAATATTAAAGAGTAATTGGCAAGTTGTCTATGACATGCTAAATGGCACTAACACAAGTGGATTCGGGTGGGATCCCATTACTCAGCGTGTTATTGTACCAAAGCAAGTATGGAATGAATATTTGAAGGTCCACAAAAAGGCAGGCCCATTTAAAACAAAACCATTCATCCATTATGAACCATTATGCATTGTATGGGCAAAAGACAGAGCAACAAGAATTGACACCCAAACTGCCAAAGATGTTGTGGAAGAAGAGGATGCTATGAACTTGAAAGATGATGCTGAAAACGTGGGGACCCTCGGCTACAAGCTGAGAATGGCACACCTGACAATGATGCTACCTATTCTGAGTTACAATCAACTCTAA 1617 0.4162 MDNLIFEDKKPLLGNGLSKTAAEAKALIEGLNAAIALDLNRITYCCTYYPLYQFVSGRWPPKQRKIAMLVNQVTLLQRKFTYCNPKLVPGEDVKFTFNFAKDAIMSQITMPAESSCTKNLNETCVICLEDTDVSHIFSVDGCQHRYCFSCMKQHVKATLLHGMNRIKEASILVSEKIYCPYPRCSALMSKTELLDSAKRKFGDPEQSGPKNCIKCHGLFCISCKVPWHSGQTCRVYKMLNPNPPAEDLKPKSLATRSLWQQCVKCNHMIELAEGCYHMTCRCGYEFCYNCGAEWKNKKATWIYSKLPNQWLQTQRISNGNGLRTGYLQHLEVMMAEKLPGYGLKGNPHIQSRLKILKSNWQVVYDMLNGTNTSGFGWDPITQRVIVPKQVWNEYLKVHKKAGPFKTKPFIHYEPLCIVWAKDRATRIDTQTAKDVVEEEDAMNLKDDAENVGTLGYKLRMAHLTMMLPILSYNQL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00276 475 SUPERFAMILY RING/U-box 122 189 - -
Bach3g00276 475 ProSitePatterns Zinc finger RING-type signature. 142 151 IPR017907 -
Bach3g00276 475 Pfam Myb/SANT-like DNA-binding domain 336 394 IPR024752 -
Bach3g00276 475 SUPERFAMILY RING/U-box 251 298 - -
Bach3g00276 475 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 316 450 - -
Bach3g00276 475 SMART ibrneu5 159 233 IPR002867 GO:0008270
Bach3g00276 475 SMART ibrneu5 246 294 IPR002867 GO:0008270
Bach3g00276 475 ProSiteProfiles TRIAD supradomain profile. 120 309 IPR044066 -
Bach3g00276 475 Gene3D - 231 317 - -
Bach3g00276 475 CDD BRcat_RBR_unk 173 233 - -
Bach3g00276 475 Pfam IBR domain, a half RING-finger domain 254 296 IPR002867 GO:0008270
Bach3g00276 475 Pfam IBR domain, a half RING-finger domain 175 233 IPR002867 GO:0008270
Bach3g00276 475 Pfam Reverse transcriptase-like 3 103 IPR002156 GO:0003676|GO:0004523
Bach3g00276 475 ProSiteProfiles Zinc finger RING-type profile. 124 183 IPR001841 -
Bach3g00276 475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 202 IPR013083 -
Bach3g00276 475 Gene3D - 2 110 IPR036397 GO:0003676
Bach3g00276 475 CDD Rcat_RBR_unk 259 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00276 Bach-Chr3 7982962 7986500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00276 21 292 C3H Transcription Factor Family AT2G19610 30.293 5.90e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00276 - - qsa:O6P43_000294 488.034