Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00275 ATGACTGGTACTCAGTTCTTTTGTACTGTTCTGGGATTTGCTTTCTTGGTCACAGCGAGACAGTCGGTAAGCCATGGAAAATTGGGAGGGCTAGTCAAACAGGTGTTTCATCTCCAAGAAAAATTTGTATCTTGTGTGCCATCTCTTGTTGGAAGGAATGATATCAAATATGCTTTTAAATCTGCAAGAGATTCCATAGTTTCTCAAATCACATGGTCTGAAGAAACTGATAACGGCAAGATCTTGAAGGAAACTTGTGTCATTTGTTTTGAAGATCTTGATGTTGATAAAATATTTTCAGTGAATAATTGCCTGCACAGGTATTGTTTCTCATGTATGAAAAAGCATGTGGAGGTGAAGCTGCTTAATGGGATGATGGCAAATTGCCCTCATGATGGTTGTAAATCGGAGGTGAAAGTTGATAGTTGCAGAAATTTTTTAGCGCCAGAGTTGGTGGAAGTCATCAGCCAACGCATTAAGGAATCAGCTATTCCTATAACAGAGAAAGTGTATTGCCCTTTTCCTAGGTGCTCAGCTTTGATGTCAAAGCATGAGCTCTTAGAGTACACAAAGACTTCGTTTATTGGAGCTGAACAATCTGGAGCCAGGAAATGCATGAAATGCCTTCAATTTTTCTGTATGAATTGCGGGGTCCCCTGGCATTACAATATGATCTGTCATGACTATAAAAGGTCAAATCACTATCTTCAGGCAGCAGATACTAAGCTGAAGTCTCTTGCTTCCAGAAATCTCTGGCGGCAGTGTGTGAAGTGCAATCACATTGTTGAACTAGCTGAAGGTTGCTATCATATTACATGCAGGTGTGGCTATGAATTTTGCTACACGTGTGGAGCAGAGTGGATGAACAAGAAAGCAACATGCTCCTGTCCAATTTGGGATGAGCGCAACATAATACGTGATTAG 924 0.4069 MTGTQFFCTVLGFAFLVTARQSVSHGKLGGLVKQVFHLQEKFVSCVPSLVGRNDIKYAFKSARDSIVSQITWSEETDNGKILKETCVICFEDLDVDKIFSVNNCLHRYCFSCMKKHVEVKLLNGMMANCPHDGCKSEVKVDSCRNFLAPELVEVISQRIKESAIPITEKVYCPFPRCSALMSKHELLEYTKTSFIGAEQSGARKCMKCLQFFCMNCGVPWHYNMICHDYKRSNHYLQAADTKLKSLASRNLWRQCVKCNHIVELAEGCYHITCRCGYEFCYTCGAEWMNKKATCSCPIWDERNIIRD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00275 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 164 IPR013083 -
Bach3g00275 307 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 68 295 IPR031127 GO:0004842|GO:0016567
Bach3g00275 307 SUPERFAMILY RING/U-box 85 165 - -
Bach3g00275 307 CDD BRcat_RBR_unk 167 229 - -
Bach3g00275 307 CDD Rcat_RBR_unk 252 287 - -
Bach3g00275 307 Pfam Zinc finger, C3HC4 type (RING finger) 86 130 IPR018957 GO:0046872
Bach3g00275 307 ProSiteProfiles TRIAD supradomain profile. 82 300 IPR044066 -
Bach3g00275 307 SUPERFAMILY RING/U-box 242 303 - -
Bach3g00275 307 FunFam RBR-type E3 ubiquitin transferase 224 307 - -
Bach3g00275 307 ProSiteProfiles Zinc finger RING-type profile. 86 132 IPR001841 -
Bach3g00275 307 SMART ibrneu5 240 296 IPR002867 GO:0008270
Bach3g00275 307 SMART ibrneu5 153 226 IPR002867 GO:0008270
Bach3g00275 307 Pfam IBR domain, a half RING-finger domain 168 226 IPR002867 GO:0008270
Bach3g00275 307 Pfam IBR domain, a half RING-finger domain 244 294 IPR002867 GO:0008270
Bach3g00275 307 ProSitePatterns Zinc finger RING-type signature. 104 113 IPR017907 -
Bach3g00275 307 FunFam RBR-type E3 ubiquitin transferase 82 166 - -
Bach3g00275 307 Gene3D - 224 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00275 Bach-Chr3 7971525 7973034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00275 5 285 C3H Transcription Factor Family AT2G19610 37.324 3.73e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00275 - - qsa:O6P43_000295 503.056