Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00222 ATGTTTAGCCAATCTGAATCACCCACCAAGCCCATGACTCCACTGAACCAAATGCTTCAGAGTATATTCTCAGACAATAGCAACATCATGCTTGCAGCAATCATTTCTCTGCTTCTGGTCATTCTCTTCGTGCTTCTTCTTCATGTCTACGCCAAATGGTTCTTGGCTCAGGCACAAGGACAAACACAAGCTCGCCGACGCCGTCGCCGGAGAACGGTGACCGTCTCCAACGTTCTGGGTCCTGCTCGGTTCCACAACTTCACCATTGAAGACTCACCCTTCTCGAGTTCCCCAACCAAAGGGCTCGATTCTGCAGTCATTTCTGCAATTCCTCTTTTCATATACGAAGAAACAGAGGAAAGTGAGAAACAGAGCAAGGGTGAGCACGAGTACGAATTGGAATGTGTTATTTGCTTGAGTTCTTTTGGAGAGGGTGAAATTGGGAGGTGTTTACCCAAATGCAGGCATTGTTTTCATGTGGAATGCATTGATATGTGGCTGGGTTCACATTCCAACTGCCCTATTTGCAGAGCTCCAATTGCAGGTGGGATTGTTGAGAATGATTGTCAATTGAGTTCTCTTTATGGAGATGATTCTTCTTCTGTGGTTGAGATTTTGATTGATCCTCCAAGCTCTGAGGTAAGTGAGAATGAGAATGGAAGTGATAGTAATGGCAGTGTTAATGCGAGTGCTTCTCTTTCTATATCAGAAAATTCATCCTCTTTGCCGGGAGTGGGATGCACTTTGAAGAGGGTTCTAAGCAAAGTTTTCCCATCTTCTAACGTTAATCAGTAA 795 0.4465 MFSQSESPTKPMTPLNQMLQSIFSDNSNIMLAAIISLLLVILFVLLLHVYAKWFLAQAQGQTQARRRRRRRTVTVSNVLGPARFHNFTIEDSPFSSSPTKGLDSAVISAIPLFIYEETEESEKQSKGEHEYELECVICLSSFGEGEIGRCLPKCRHCFHVECIDMWLGSHSNCPICRAPIAGGIVENDCQLSSLYGDDSSSVVEILIDPPSSEVSENENGSDSNGSVNASASLSISENSSSLPGVGCTLKRVLSKVFPSSNVNQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00222 264 CDD RING-H2_EL5-like 134 177 - -
Bach3g00222 264 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 21 180 IPR044675 -
Bach3g00222 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 182 IPR013083 -
Bach3g00222 264 SMART ring_2 135 176 IPR001841 -
Bach3g00222 264 SUPERFAMILY RING/U-box 114 180 - -
Bach3g00222 264 MobiDBLite consensus disorder prediction 210 230 - -
Bach3g00222 264 FunFam RING-H2 finger protein ATL1 89 182 - -
Bach3g00222 264 MobiDBLite consensus disorder prediction 212 230 - -
Bach3g00222 264 Pfam Ring finger domain 134 177 IPR001841 -
Bach3g00222 264 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00222 Bach-Chr3 5662880 5663674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00222 23 178 Rapid Response to Elicitors AT3G16720 39.241 8.37e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00222 - - qsa:O6P43_014072 253.062