Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00207 ATGTGCAGTGGTTCCAAGAGGAAACCTTCTGAAACAGACTTTGGGATGGAGGGCGAATATGGGAAAAAAGAAGGGCTGAATGATAAAAAAATTTCCCTTTTGCTCGAGCTTTCAGCCTCAGATGATTTGAAGGGTTTCAGATATGCTGTGGAACAAGAGGGTCTTGATATTGATGAGGTGAGTTTATGGTATGGAAGGAGGATTGGTTCGAGGAAATTTGGTTTTGAAGAGAGGACACCCCTCATGATTGCTGCTATGTTCGGAAGCAAGGAGGTATTATCTTATATCCTTGAAACAGGCTGTGTTGATGTTAACCGAACTTGTGGGTCAGATGAGACCTCAGCCCTCCATTGTGCTATTGCTGGTTGCTCTGCTACTTCTCCTGAGGTTGTCAAGCTCTTGCTTGATGCATCTGCAAATGTTGGTGCTGTTGATTCAAATGGTAAAATACCTTGTGATTTGATCGTGACTGCGGCTAAGGATATCTTCAATTCAAGGAAGAGGATGCTACGAGCTATCCTCCAAGGTACAGATGGTATCGTTGAGGCATGTTTTTTATCTGAGGAAGCAGTTGGTCAAATTGAGGAGGAGGAGCAGCAAGATATGACCACACCACGTGTTTCAAAAGATGGAACCGAGAAGAAAGATTATCCTGTTGATCACTCTCTTCCAGACATAACAAATGGGATCTATGGTACTGATGAGTTTAGAATGTATACATTCAAAGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACCGAGTGCCCCTTTGTTCATCCTGGGGAAAATGCAAGGCGGCGTGACCCACGAAAATATCATTATAGCTGTGTCCCTTGTCCTGAGTTTAGGAAAGGATCGTGCAGTAAAGGGGATGCTTGTGAATATGCCCATGGTATTTTTGAATGCTGGCTGCACCCTGCTCAGTATCGTACCCGGCTATGCAAGGATGAGGGTGCATGCACCAGAAGAGTTTGCTTCTTTGCTCACAAACCTGTGGAGCTTCGCCCCTTGTATGCTTCTACAGGTTCAGCTATGCCTTCACCAAGATCATTTTCATCTAGTGCTTCTTCATTGGAAATGGGACCAATTACCCCTCTTACACTTGGTTCTCCATCTGTCTTAATACCCCCTACCTCAACACCACCTTTGACTCCATCTGCAGCATCCTCTCCTGGGGTTGGTACATTGTGGCCATCCCAGTCTAGTAGTGCAGTCCCTACCCTGCAACTGCCCAGTAGTAGATTGAAAACTGCGTTAGCTGCTAGAGATCTTGATTTAGATATTGAATTGCTGGGACTTGAAAATCATCGACGCAAACAGCAGTTAATGATGGATGAGATGTCTGGGCTTTCCTCTCCATCTGGCTGGAACATGTCTAATAATTCGCCCTTTCCTGTTTCTTTAGGTGATCATGCTGGGGAGATAAATAGGCTTGGAGGGCTAAAACCTACTAACCTTGAAGATTATTTTGGGTCTCTTGATCCATCAATTTTTTCTAAATTACAGGGAATCTCACTAGATGCTGTAGGGTCACATTTACAATCTCCAACTGGAATCCAAGCTCGTCATAATGGAAACCAGCAGCTACGAAGCTATTCATCTGGCCTTTCCACTTCTAATGTGATGGGATCACCAGCATTTGGGGTTGAGCCATCTGGCACAGCAGCTACCATGGCTTTCAATTCAAGAATTGCAGCCTTTTCAAAGCGGAGCCAGAGCTTTGTTGAGCGCAGTGTAGTGAACCATCACTCAGAGTTTTCTTCCCCTTCTGCTTCTGTAGGAATGAAGCCTTCTCTCTTCTCTGATTGGGGCTCTCCTGATGGCAAATTGGATTGGGCTATCCATGGAGAAGAGCTGAATAAGCTGAGGAAATCCGCATCTTTTGGGTTTAGGAGAAGTGATAGTCCTCTAAAAATGCCTGCAACCAGAGTGGCAGCAGATGCTAATGACCCAGATGTATCTTGGGTTCATTCACTTGTGAAGGATGCTCCCTCTTCTGAATCGGGACAGTTTAGTGTTGAAGAGCAGCAGCAGATGCTGCAATGCCATCACAACAATGGAACAGAAACAGTTCCTGCCTGGTTGGAGCAATTGTACAAGGAGCAGGAGCAGATGGTGGCGTGA 2130 0.4526 MCSGSKRKPSETDFGMEGEYGKKEGLNDKKISLLLELSASDDLKGFRYAVEQEGLDIDEVSLWYGRRIGSRKFGFEERTPLMIAAMFGSKEVLSYILETGCVDVNRTCGSDETSALHCAIAGCSATSPEVVKLLLDASANVGAVDSNGKIPCDLIVTAAKDIFNSRKRMLRAILQGTDGIVEACFLSEEAVGQIEEEEQQDMTTPRVSKDGTEKKDYPVDHSLPDITNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCKDEGACTRRVCFFAHKPVELRPLYASTGSAMPSPRSFSSSASSLEMGPITPLTLGSPSVLIPPTSTPPLTPSAASSPGVGTLWPSQSSSAVPTLQLPSSRLKTALAARDLDLDIELLGLENHRRKQQLMMDEMSGLSSPSGWNMSNNSPFPVSLGDHAGEINRLGGLKPTNLEDYFGSLDPSIFSKLQGISLDAVGSHLQSPTGIQARHNGNQQLRSYSSGLSTSNVMGSPAFGVEPSGTAATMAFNSRIAAFSKRSQSFVERSVVNHHSEFSSPSASVGMKPSLFSDWGSPDGKLDWAIHGEELNKLRKSASFGFRRSDSPLKMPATRVAADANDPDVSWVHSLVKDAPSSESGQFSVEEQQQMLQCHHNNGTETVPAWLEQLYKEQEQMVA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00207 709 FunFam Zinc finger CCCH domain-containing protein 66 233 301 - -
Bach3g00207 709 MobiDBLite consensus disorder prediction 387 406 - -
Bach3g00207 709 SMART c3hfinal6 275 301 IPR000571 GO:0046872
Bach3g00207 709 SMART c3hfinal6 310 333 IPR000571 GO:0046872
Bach3g00207 709 MobiDBLite consensus disorder prediction 195 219 - -
Bach3g00207 709 MobiDBLite consensus disorder prediction 199 219 - -
Bach3g00207 709 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 280 300 IPR000571 GO:0046872
Bach3g00207 709 Pfam Ankyrin repeats (3 copies) 69 143 IPR002110 GO:0005515
Bach3g00207 709 SMART ANK_2a 111 143 IPR002110 GO:0005515
Bach3g00207 709 SMART ANK_2a 76 106 IPR002110 GO:0005515
Bach3g00207 709 PANTHER UNKEMPT FAMILY MEMBER 36 665 IPR045234 -
Bach3g00207 709 Gene3D - 5 166 IPR036770 -
Bach3g00207 709 Gene3D - 275 338 - -
Bach3g00207 709 ProSiteProfiles Ankyrin repeat profile. 111 146 IPR002110 GO:0005515
Bach3g00207 709 MobiDBLite consensus disorder prediction 373 406 - -
Bach3g00207 709 ProSiteProfiles Zinc finger C3H1-type profile. 280 302 IPR000571 GO:0046872
Bach3g00207 709 SUPERFAMILY Ankyrin repeat 30 156 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00207 Bach-Chr3 4862152 4864281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00207 28 704 C2H2 Transcription Factor Family AT5G12850 38.187 3.32e-135 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach3g00207 Ank_2 2.7e-08 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00207 - - aprc:113846970 982.63