Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00188 ATGTCTTCTTTTGATGAATTTGATCCTCCTTCTTCACCAAGCCCTAATCAATCACCGCCATCACCACCTGATGACTCCAATGATTCATCTGCAACATCTCCATCACCATCCATTGGATCGCCACCGGCTCCACCTTCTGGAAGCAAGTCCTCTCCACCATCACCAATCCTACCTCCACCTCCCCGACATAAATCCTCACACTCACATGGATCACGACCATCACCATTGCCACCTTCTGATGGTGGGGGGCAGGATGCATTTTCAAAAAGGGCAGCAATCGGTGCAGGCATAGGGCTTGGGCTAATTTTATTTATTTGGATCTTAATTTGTATGATTCGCTTGAGAAGGAAGAAAAGAGAGGAAAAGTACTATTATGGAGAAGGAAAAGGGAGTGATAATTACAACAACGGGAAGTACTCTAATTATTACACAGGTCATGAAGGAGATAATGCGAGAATGAATCAAATGGGTGGCTGGGATGCACGATCACCTGCCCAAGCAATGAATGACAATGATTCTAGCTATAATCTCTCTTCAATGGAGCCACCTCTACCTCCTCCTCCTCCAATTTCACGCGGCACCTTCACATATGAGGAATTGGAGTCTGCTACAGGTGGATTCGATGAAAAGAACTTGTTGGGACAGGGTGGGTTTGGCTATGTCCATAAGGGCATATTGCCTAATGGAAAGGAAGTTGCAGTTAAGAGCCTTAAAGCAAACAGTGGGCAAGGAGAGCAGGAATTCCAAACTGAGGTTGATATCATTAGCCGTGTTCATCATCGCCATCTTGTGTCCCTTGTTGGATATTGTATTTCTGGCAGAAAGAGATTGTTGGTCTACGAATTTGTCCCCAACATGACTTTGGAATATCACCTTCATGGAAAGGCTATGCCTACTATGGACTGGTCTACTAGACTACGGATTGCAGTTGGATCTGGCAGAGGGCTTGCATACCTTCATGAAGAATGTCCTTTACGAATTATTCATCGCGATATCAAAGCTTCGAATATCCTCCTTAACCTAAACTTCGAACCCAAGGTGGCTGATTTTGGATTGGCAAAATTGACAAATGATAATCATACTCACGTGTCAACTCGTGTCATGGGAACTTTTGGGTACTTGGCACCAGAATATGCATCTAGTGGAAGACTGACTGAGAAATCTGATGTTTACTCATTTGGGGTCATGTTATTGGAACTTATCACTGGGAAGCCACCTGTTGGTGACATGAATCCGCATGAGGAAGGCTTAGTTGATTGGGCTCGACCACTACTGAACACTGGACTGCAGAATGGGAACTTAAGGGAGTTGATGGATCCTTTTTTGGAGGGCAATTATAATGAGCAAGAAATGATGAGGATGGCATACTGCGCTTCTGCAAGCCTCCGGCATTCTTCCAAAAAGCGTCCTAAGATGAGCCAGATAGTAAAAGTATTGGAAGGAGTTTTGTCACTGGAAGATTTGTCCTCTAATTGA 1476 0.4438 MSSFDEFDPPSSPSPNQSPPSPPDDSNDSSATSPSPSIGSPPAPPSGSKSSPPSPILPPPPRHKSSHSHGSRPSPLPPSDGGGQDAFSKRAAIGAGIGLGLILFIWILICMIRLRRKKREEKYYYGEGKGSDNYNNGKYSNYYTGHEGDNARMNQMGGWDARSPAQAMNDNDSSYNLSSMEPPLPPPPPISRGTFTYEELESATGGFDEKNLLGQGGFGYVHKGILPNGKEVAVKSLKANSGQGEQEFQTEVDIISRVHHRHLVSLVGYCISGRKRLLVYEFVPNMTLEYHLHGKAMPTMDWSTRLRIAVGSGRGLAYLHEECPLRIIHRDIKASNILLNLNFEPKVADFGLAKLTNDNHTHVSTRVMGTFGYLAPEYASSGRLTEKSDVYSFGVMLLELITGKPPVGDMNPHEEGLVDWARPLLNTGLQNGNLRELMDPFLEGNYNEQEMMRMAYCASASLRHSSKKRPKMSQIVKVLEGVLSLEDLSSN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00188 491 FunFam Proline-rich receptor-like protein kinase PERK8 188 282 - -
Bach3g00188 491 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 102 489 IPR047117 -
Bach3g00188 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Bach3g00188 491 FunFam proline-rich receptor-like protein kinase PERK8 283 491 - -
Bach3g00188 491 SUPERFAMILY Protein kinase-like (PK-like) 180 480 IPR011009 -
Bach3g00188 491 Gene3D Transferase(Phosphotransferase) domain 1 283 489 - -
Bach3g00188 491 ProSiteProfiles Protein kinase domain profile. 207 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00188 491 ProSitePatterns Protein kinases ATP-binding region signature. 213 235 IPR017441 GO:0005524
Bach3g00188 491 CDD STKc_IRAK 213 481 - -
Bach3g00188 491 SMART serkin_6 207 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g00188 491 MobiDBLite consensus disorder prediction 37 62 - -
Bach3g00188 491 MobiDBLite consensus disorder prediction 1 87 - -
Bach3g00188 491 Gene3D Phosphorylase Kinase; domain 1 187 282 - -
Bach3g00188 491 Pfam Protein tyrosine and serine/threonine kinase 210 414 IPR001245 GO:0004672|GO:0006468
Bach3g00188 491 MobiDBLite consensus disorder prediction 169 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00188 Bach-Chr3 3824576 3827955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00188 77 490 Trihelix Transcription Factor Family AT1G70460 48.364 6.63e-131 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bach3g00188 PK_Tyr_Ser-Thr 7.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00188 - - gmx:100777163 516.924