Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00187 ATGGCGGTCGAAGTGACACGCTGTTTTGGGAGGAGGAAGCGCAAAAGACGGTCTGCGAATGGGAAAAGGAAACTCTGTGTTCGTGAGAAAGTGGAGGTAAGGAGTTTCGAAAATGGCTTTCTGGGTTCATGGCACCCGGGGACCGTTATCCTATGTGGAAAACAGAAACGTCATGTGAGATATGATAATGTTTTAGATGATGATGAGTTGAATTATATCACTGAAGTGGTGGATGTTCCTGCTGTTTTGGATGGTGTCTCTTCATTAACTTGCAATGGACGCGGGTTCATTAGACCACTGCCTCCTTTGTTAGAGTTTGGGAGTTTGGAGCTTCGATATGGTCTTTGTGTTGATGTGAACTATCAGGAAGCTTGGTGGGAAGGAGTTATTTTTGATCATGACGATGGTATGCAGGAGAGGAGGATATTTTTCCCAGATATAGGTGATAAAATGAAGATTGGCATTGATCAACTGCGCATTACTCAGGACTGGGATGAAGTTACAGAAAATTGGGAGCAGCGAGGGAACTGGGTATTTCTTGAATTGGTTGAGGAGTGTGAACAGGCATCATATATTGCAGTTTCAGTGAAACAAATTTGGTACGATTTGCGAGCAAGAAAGGATTTTGATAAGATTAGGGACTGGACTTTTAAGGCAAAGAACTTGTGGAGAGACTTGGTAATAGATGTAATTGGTGAATACTTAACTCTTACATTAAAAGAACTCATCCCAGTCTTGGAGATTTCAAACAGTTCCATAGAAAAAGCAGTGGAACAAGAGTCAGTTGAACTTACTGCTGATGTTCATGATGATGCTAGTCTTAAGAATATGGCTGGTTCTTATATTGAATATGTTGCCAGCCCAAAGGAAAAATGCGACTTCCCAACTGTACTGGATACTGATCCAAACTTAGAGGCTTCCACTCCCACTCAAGAGGGATATGATATGCATACCCTAGGTGGAGTACCAACTCTGCATATTGAGGAAGCTTTAAAGATTTCCTGCCCTGAGAAAGAAGTCTTGCTGCAGGATGAATCTTTGCCTCCCGTTGAAGAAATGTTACCTCAGAATCCAGAAAATATTTCCTGCTACAATTCTGGTGCTATTGGTGTAGTAGTTTCTGGTTCAAAATGTTATGAAAAAAGCAGAAAATTCAAAGGGGGTACTAGCTCTGTACGCTGGGAACTCTTGGAACTACCTGGAGCAGAATTTTGCCCTGATGCTGTTAATGAGTATGTTGCAGCAAGCCTTAGGAAAACTAAGGAACTTATGAAGATCAAAGTTCGTAAACATCTTGCATTTTTGGGATGGAAAATTGAGTTTAGAGAGATAAAATCCCTTTACAATCAACGGCATTACAAGTACACCTCACCTGGTGATGAGAAGTGTTACATGTCTCTTTATCAAGTTTGTAAACATTTGGAAAATGAAACCAGTATGAACTCTTTATCTTCTCAAGAGAATCATGGAATGATGCATCCATCACCTGACAGTAGCATTTCACATCTGCACCTTGAACAAACAGAAAATAGTTGGGATCCAGATGATTTTTCCACATTTGTACCCCCTCCGCCTCTTGAAGTTACTGTCAATCCTGAATATTTTCCTCAAGCTGTTGTGGAATATTACATGATGGCATTAAATAAGTCCCACAAGGCTGTTAAGAGAAATATGATACTAAAAGCAAAGGAACAATTATTATCAGCGGGGTGGACTGTTAACTATGGATGTAAGACAACAAAACAGTTGACGTACACGTCACCAAAACAAAGGACTTATCACTCACTTCGGAGAGCCTGTGGCAGTTACATCAAAGAAAGTATTGCTAATTTGAATATATGTGACTTGGAACCTTTGGATACCCTAGGCATCAATGAGGGGAGCGTAGGACAGATTGGGAATGATAATTTATTACATCAGTTATTTCAAAAAGAACCTGAACTGCTCAATGGAAATGGCAGGCAAAAATGGAAACACTTGAAAAATTTGAAGTCCATTCTACCAAAAGTAGAGGAAAAGGAATTTCCTAATCAGGTGTTAAGATCAACCAAAAGGGTTCAGAATGTGCATGCTCCTAGTCTACCGCACCAAAAGACTTTAAATGTACTCTCTTGGTTAATAGACAGCAAGGTGGTGTCGCCAAGAGCAAAGGTCTATTATCAGGCAAGAGGTAAACCTTGTTCTAAGAGTAAGGGCCGAATAACTCGTTATGGTATCAAGTGTAACTGTTGTCTGAATATATATAGTCTTGGAGGCTTTGAAGGTCATGCTAGTGGCAGTATTAGCCGCAGTCCTGCTGTTAGTATCTTTTTGGAAGATGGTAGGTCACTTGTAGATATCCAGATGCAAATCTTGCATGATTATCAGAAAAGAGAATCTCCAGCAAATCCATCTAGTGATTGGCATCAAGGCAAGAATGACAGCATTTGTTCTGTTTGTCACTTTGGTGGAGATCTAATTTTATGTGATCAATGCCCTTCATCGTTCCACAGTGATTGCCTCAGTTTGGAGGACATCCCTGATGGTGACTGGTTTTGCCCATCATGTCAATGTGGGATTTGTGGTCAAAGCAAAATTGACGGGATGGATGATGGAAATTTTCTTACTTGTAGTCAGTGTGAACATAAATATCATCTTTGGTGCCTGCAAAATGGAGGGTTAGATAAGTCCCGAAGCTGTGGGGAAAATTGGTTTTGCAGCAAAAATTGTGAGAAGATATATGCTGGCCTCCACAAACTACTAGGAGAGCCAGTTGTTGTTGGTGAGAATAACCTACAATGGACATTGCTGAAGTGGGTGAACTCTGACAGTTGTCATCTTAGTAGTAATGATAACTACTTGGCTGAGAGTTACTGCAAACTCAATGTTGCTCTTGGGTTAATCCATGAATGTTTTGAGACCCTAAAGGAACCTGATTCTAAAAGAGATCTCATGGAAGATGTTCTTTTCAGCAGATGGTCCGAGCTTAAGCGATTAAACTTCCAAGGCTTTTATACTGTACTTCTGGAGAGAGAAGATGAATTGATTAGTGTTGCTACTCTAAGGGTCTATGGAGAGAAGGTTGCTGAAGTACCTCTTGTTGGTACCAGAGTTCAGTATCGTCGACGTGGAATGTGTCGGATTTTAATGAATGAACTTGAGAAGATTCTCAAGCAATTGGGGGTGGAGAGGCTGGTTTTGCCTTCTGCTCCTGTGACACTGGACACTTGGACTACTTATTTTGGCTTTTCAAAGATGACAAATTCCGACAGAAAACAGTTTCTGGACTATACTTTCCTTGATTTTCAGCAGGCTATCATGTGCCAGAAACTGTTGAAAAGGACTCCTCAAGATATAGTTCTGTCAAGAGAGACCAAGCAAAAGTCCCACGATATTTTATCTGTAAGCAGAAAAATTGATTTTGACAGATCAAGTTCTTTATCTGAAGTACATCAAGCAGAAGATGTCAAAAGTACCAGGGATACCTGA 3468 0.4051 MAVEVTRCFGRRKRKRRSANGKRKLCVREKVEVRSFENGFLGSWHPGTVILCGKQKRHVRYDNVLDDDELNYITEVVDVPAVLDGVSSLTCNGRGFIRPLPPLLEFGSLELRYGLCVDVNYQEAWWEGVIFDHDDGMQERRIFFPDIGDKMKIGIDQLRITQDWDEVTENWEQRGNWVFLELVEECEQASYIAVSVKQIWYDLRARKDFDKIRDWTFKAKNLWRDLVIDVIGEYLTLTLKELIPVLEISNSSIEKAVEQESVELTADVHDDASLKNMAGSYIEYVASPKEKCDFPTVLDTDPNLEASTPTQEGYDMHTLGGVPTLHIEEALKISCPEKEVLLQDESLPPVEEMLPQNPENISCYNSGAIGVVVSGSKCYEKSRKFKGGTSSVRWELLELPGAEFCPDAVNEYVAASLRKTKELMKIKVRKHLAFLGWKIEFREIKSLYNQRHYKYTSPGDEKCYMSLYQVCKHLENETSMNSLSSQENHGMMHPSPDSSISHLHLEQTENSWDPDDFSTFVPPPPLEVTVNPEYFPQAVVEYYMMALNKSHKAVKRNMILKAKEQLLSAGWTVNYGCKTTKQLTYTSPKQRTYHSLRRACGSYIKESIANLNICDLEPLDTLGINEGSVGQIGNDNLLHQLFQKEPELLNGNGRQKWKHLKNLKSILPKVEEKEFPNQVLRSTKRVQNVHAPSLPHQKTLNVLSWLIDSKVVSPRAKVYYQARGKPCSKSKGRITRYGIKCNCCLNIYSLGGFEGHASGSISRSPAVSIFLEDGRSLVDIQMQILHDYQKRESPANPSSDWHQGKNDSICSVCHFGGDLILCDQCPSSFHSDCLSLEDIPDGDWFCPSCQCGICGQSKIDGMDDGNFLTCSQCEHKYHLWCLQNGGLDKSRSCGENWFCSKNCEKIYAGLHKLLGEPVVVGENNLQWTLLKWVNSDSCHLSSNDNYLAESYCKLNVALGLIHECFETLKEPDSKRDLMEDVLFSRWSELKRLNFQGFYTVLLEREDELISVATLRVYGEKVAEVPLVGTRVQYRRRGMCRILMNELEKILKQLGVERLVLPSAPVTLDTWTTYFGFSKMTNSDRKQFLDYTFLDFQQAIMCQKLLKRTPQDIVLSRETKQKSHDILSVSRKIDFDRSSSLSEVHQAEDVKSTRDT 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00187 1155 Pfam Tify domain binding domain 732 783 IPR032308 -
Bach3g00187 1155 CDD Tudor_Agenet_AtDUF_rpt1_3 29 102 - -
Bach3g00187 1155 CDD PHD2_CHD_II 810 849 - -
Bach3g00187 1155 PANTHER PHD FINGER PROTEIN 12 531 1151 IPR042163 GO:0003714|GO:0045892
Bach3g00187 1155 Pfam PHD-finger 809 851 IPR019787 -
Bach3g00187 1155 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 959 1106 IPR000182 GO:0016747
Bach3g00187 1155 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 985 1079 IPR016181 -
Bach3g00187 1155 Pfam Agenet domain 29 102 IPR008395 -
Bach3g00187 1155 SUPERFAMILY FYVE/PHD zinc finger 789 850 IPR011011 -
Bach3g00187 1155 ProSiteProfiles Zinc finger PHD-type profile. 807 852 IPR019787 -
Bach3g00187 1155 SMART agenet_At_2 109 166 IPR014002 -
Bach3g00187 1155 SMART agenet_At_2 23 87 IPR014002 -
Bach3g00187 1155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 852 906 IPR013083 -
Bach3g00187 1155 Gene3D - 958 1086 - -
Bach3g00187 1155 MobiDBLite consensus disorder prediction 1134 1155 - -
Bach3g00187 1155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 801 851 IPR013083 -
Bach3g00187 1155 Pfam Acetyltransferase (GNAT) family 976 1061 IPR000182 GO:0016747
Bach3g00187 1155 CDD NAT_SF 1000 1060 - -
Bach3g00187 1155 SMART PHD_3 809 850 IPR001965 -
Bach3g00187 1155 SMART PHD_3 851 903 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00187 Bach-Chr3 3767369 3780469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00187 34 243 PHD Transcription Factor Family AT5G58610 47.664 9.33e-62 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach3g00187 Acetyltransf_1 1.8e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00187 - - pcin:129318355 1241.48