Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00185 ATGGGGACGCAACCACAGCAAACATGTCGAGAGGAAGATGAGGAGGAGCTACAAGGTCGTAGAACAACAATTTCGGGCCAGTCAATGTCAACAAGCAGAAGTATTGGGTCACCATCCAGCCGGAGTGAACAGACAATGGCGACACCAGCCAGTGATAACACTTTTCTTAGATTAAACCATCTTGACATCCATGGTGATGATGCTGGATCACAGGGAGCAGTTGCTAGCAAAAAAAAAAGGAGAGGCCAACGTGCTGTTGGAGGTGATAAGAGTGGAAGAGGGCTCCGCCAGTTTAGTATGAAAGTGTGTGAGAAAGTAGAAAGCAAAGGAAGAACCACTTATAATGAGGTAGCAGATGAACTTGTGGCCGAGTTTGCTGACCCAATCAATAGTGTTTCTTCTCCAGATCAGCAACAATATGATGAAAAAAATATCCGTCGAAGAGTTTATGATGCTTTGAATGTTCTCATGGCAATGGACATTATTTCTAAGGATAAAAAGGAAATACAATGGAAGGGTCTTCCTCGTACTAGTCTGAATGATATTGAAGAATTAAAGACGGAGCGTCTTGGGCTCAGAAATAGGATCAAAAAGAAAGCAGCCTATCTGCAAGAGCTGGAGGAGCAATACATTGGTCTTCAGAACCTCGTACAACAAAATGAGCGGTTGTATAATTCAAGAAATGTTCCCAGTGGAGGTGTAGCTTTACCTTTTATTCTGGTGCAGACACGCCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTACATTTTGATTTCAACAGTACTCCTTTTGAGCTGCATGATGACAACTATGTTCTCAAGGCAATGAAATTTTGCGAGAGACCACAGAGTGATAATATGGCACACAATCATGCAGATGGTGGTCAAGGTTCTAGCATGTCAAGCTTGTATCAGGCGGAGGTTCCTCCTCCAGGTTCAAATCCCCCTGCCAGGCCTCCTACCTCACCACCACTCCCGGGAATATTGAAGGCTCGAGTTAAGCATGAGCACTAATAAGCCATGTTAAACTTCATCGATTTAGCCTTCTTAATCATATGTTTGTATATTCTGTAAAGTAATTTACCAACAATTTATACATAATCATGATAGTTCCTCAAGGATTTAGCGAAGTCATCCTGTAGGTTAATTAGAAGCAGACTGATCCATTTCTTCAGGTTTCTAGGGGTTGATTGTGGCAAATTACTTGTCTACCATGTCCATCATTTTCCAGTTTGAGTCTTGTTATTTTAAGTGTAGTTTTATCCCTTTGTAGTAAAC 1293 0.4176 MGTQPQQTCREEDEEELQGRRTTISGQSMSTSRSIGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGSQGAVASKKKRRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPINSVSSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIKKKAAYLQELEEQYIGLQNLVQQNERLYNSRNVPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQSDNMAHNHADGGQGSSMSSLYQAEVPPPGSNPPARPPTSPPLPGILKARVKHEH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00185 342 Pfam E2F/DP family winged-helix DNA-binding domain 93 173 IPR003316 GO:0005667|GO:0006355
Bach3g00185 342 SMART DP_2 180 340 IPR014889 -
Bach3g00185 342 SUPERFAMILY E2F-DP heterodimerization region 179 295 IPR037241 -
Bach3g00185 342 Coils Coil 189 223 - -
Bach3g00185 342 MobiDBLite consensus disorder prediction 294 313 - -
Bach3g00185 342 MobiDBLite consensus disorder prediction 1 93 - -
Bach3g00185 342 FunFam Transcription factor-like protein DPB 179 303 - -
Bach3g00185 342 MobiDBLite consensus disorder prediction 289 342 - -
Bach3g00185 342 Pfam Transcription factor DP 181 296 IPR014889 -
Bach3g00185 342 PANTHER TRANSCRIPTION FACTOR DP 22 324 IPR015648 GO:0005667|GO:0051726
Bach3g00185 342 PIRSF Txn_factor_DP 3 342 IPR015648 GO:0005667|GO:0051726
Bach3g00185 342 FunFam Transcription factor-like protein DPB 85 178 - -
Bach3g00185 342 SMART E2F_TDP_2 90 173 IPR003316 GO:0005667|GO:0006355
Bach3g00185 342 MobiDBLite consensus disorder prediction 314 331 - -
Bach3g00185 342 MobiDBLite consensus disorder prediction 21 55 - -
Bach3g00185 342 CDD DP_DD 178 281 IPR014889 -
Bach3g00185 342 SUPERFAMILY "Winged helix" DNA-binding domain 93 174 IPR036390 -
Bach3g00185 342 Gene3D Transcription factor DP 179 306 IPR038168 -
Bach3g00185 342 Gene3D - 86 178 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00185 Bach-Chr3 3726478 3731089 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00185 91 291 E2F-DP Transcription Factor Family AT5G02470 54.950 6.57e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bach3g00185 DP 1.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00185 K04683 - qsu:112000390 581.252