Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g00178 ATGCAGGATGTTTACTGTTTAGTGTCACGAAATCAGTGGTTTGTTTGGATTTGGCATGCAGTTGGAGGACTTCTGAATGCAACCTGTGGTAATGCAACAGAGATGATTATAGCAATATTAGCACTTCACAAGAACAAATTACATGTTGTGAAGTTCTCTCTTTTGGGTTCTATTCTATCAAACCTTCTACTAGTTCTTGGCACTGCACTTCTCTGTGAAGGCTTAGCCAATCTCAGAAAGGAACAAAAATATGATAGAAAACAAGCAGATGTGAACTCACTGCTCTTGCTGCTGGGGTTGCTGTGCCATTTGCTGCCATTACTGTTCAAATATGCCTTAGAAGGGAGCATATATCCTACAGAAACCTATACTCTCCAATTGTCAAGAGCAAGCAGTATTGTTATGCTTCTAGCATATATTGCATATATCTTCTTCCAATTAAAAACTCATCGACAACTGTTTGATTCACAAGAGGATGAAGATGAAGAGAATGCAGTGATAGGGTTTTGGAGTGCATTCACATGGCTTGTGGGTATGACATTGATCATATCCCTTCTATCAGAATATGTTGTGGGCACCATTGAGGCTGCGTCAGATTCTTGGGGAATTTCTGTTAGCTTCATTAGCATAATTTTGCTACCGATAGTGGGGAATGCTGCAGAGCATGCTGGCTCAATAATATTTGGTTTTAAGAACAAGTTGGATATCTCTCTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCAATGTTTGTGGTTCCACTAAGTGTGGTGGTTGCTTGGATAATGGGAATCCAAATGGATCTTGATTGCAATCTCCTTGAAACTGGGTCTCTTGCTTTTACAATAATTGTTACAGCATTCACTTTGCAGGATGGAACTTCCCACTACATGAAAGGAGTGGTCCTTTCTCCGTGTTATATAGTAATTTCTGCATGCTTTTTTGTTCGCAGAACTCCCTTAATTGGTACGTATCCTTTTCAAGTCATATCTAATTTCAATTTGACATTTTCCTATAAATTTAAAGTGCACATAATTCTAGACATGTTCGATGCACTCTTCTATAAGCTATTAGGTGTGTTTTTACTGTGGTAA 1095 0.3881 MQDVYCLVSRNQWFVWIWHAVGGLLNATCGNATEMIIAILALHKNKLHVVKFSLLGSILSNLLLVLGTALLCEGLANLRKEQKYDRKQADVNSLLLLLGLLCHLLPLLFKYALEGSIYPTETYTLQLSRASSIVMLLAYIAYIFFQLKTHRQLFDSQEDEDEENAVIGFWSAFTWLVGMTLIISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFGFKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIQMDLDCNLLETGSLAFTIIVTAFTLQDGTSHYMKGVVLSPCYIVISACFFVRRTPLIGTYPFQVISNFNLTFSYKFKVHIILDMFDALFYKLLGVFLLW 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g00178 364 Pfam Sodium/calcium exchanger protein 172 311 IPR004837 GO:0016020|GO:0055085
Bach3g00178 364 Pfam Sodium/calcium exchanger protein 20 147 IPR004837 GO:0016020|GO:0055085
Bach3g00178 364 FunFam Vacuolar cation/proton exchanger 162 316 - -
Bach3g00178 364 FunFam Vacuolar cation/proton exchanger 19 161 - -
Bach3g00178 364 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 19 319 IPR004713 GO:0006812|GO:0008324|GO:0016020
Bach3g00178 364 NCBIfam calcium/proton exchanger 19 315 IPR004798 GO:0006816|GO:0015369
Bach3g00178 364 Gene3D - 166 316 IPR044880 -
Bach3g00178 364 Gene3D - 19 165 IPR044880 -
Bach3g00178 364 NCBIfam calcium/proton exchanger 20 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g00178 Bach-Chr3 3563755 3570033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g00178 21 320 Antiporters AT2G38170 70.227 2.70e-140 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g00178 K07300 - gmx:100802344 494.197